Phenotype measure:   Schoenrock1   CORT_basal_VDD

ID, description, units MPD:61277   CORT_basal_VDD   basal serum corticosterone   [ng/mL]  vitamin D-deficient diet
various diets study
Data set, strains Schoenrock1   CC RIX   16 strains     sex: f     age: 8-9wks
Procedure hormone quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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Schoenrock1 - basal serum corticosterone vitamin D-deficient diet



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested16 strains
Mean of the strain means124   ng/mL
Median of the strain means124   ng/mL
SD of the strain means± 33.8
Coefficient of variation (CV)0.273
Min–max range of strain means65.5   –   190   ng/mL
Mean sample size per strain10.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 15 151139.4791 10075.9653 0.9999 0.4581
Residuals 155 1561876.3384 10076.6215


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 011) f 147.0 79.0   18 18.6 0.539 17.4, 335.0 0.68
RIX:CC(003 x 014) f 142.0 72.8   8 25.7 0.511 51.4, 286.0 0.53
RIX:CC(004 x 017) f 68.8 32.4   14 8.65 0.471 29.3, 133.0 -1.63
RIX:CC(006 x 026) f 190.0 125.0   9 41.7 0.659 44.3, 436.0 1.95
RIX:CC(011 x 001) f 152.0 92.7   8 32.8 0.612 12.1, 275.0 0.83
RIX:CC(014 x 003) f 88.2 101.0   6 41.2 1.14 29.0, 290.0 -1.06
RIX:CC(017 x 004) f 120.0 74.4   12 21.5 0.621 29.0, 258.0 -0.12
RIX:CC(023 x 047) f 100.0 137.0   8 48.3 1.36 22.9, 432.0 -0.71
RIX:CC(026 x 006) f 97.4 54.0   14 14.4 0.554 20.7, 207.0 -0.78
RIX:CC(032 x 042) f 122.0 134.0   18 31.6 1.1 13.4, 392.0 -0.06
RIX:CC(035 x 062) f 164.0 128.0   5 57.1 0.777 18.1, 291.0 1.18
RIX:CC(041 x 051) f 126.0 104.0   20 23.2 0.827 16.8, 454.0 0.06
RIX:CC(042 x 032) f 122.0 111.0   6 45.2 0.906 17.4, 260.0 -0.06
RIX:CC(047 x 023) f 65.5 55.8   5 24.9 0.852 29.0, 164.0 -1.73
RIX:CC(051 x 041) f 133.0 128.0   14 34.3 0.966 16.1, 460.0 0.27
RIX:CC(062 x 035) f 145.0 124.0   6 50.5 0.854 15.6, 277.0 0.62


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 011) f 146.51 23.6604 193.2484 99.7716
RIX:CC(003 x 014) f 142.4987 35.4905 212.6063 72.3912
RIX:CC(004 x 017) f 68.7621 26.8283 121.7585 15.7658
RIX:CC(006 x 026) f 190.0167 33.4608 256.1147 123.9186
RIX:CC(011 x 001) f 151.56 35.4905 221.6675 81.4525
RIX:CC(014 x 003) f 88.235 40.9809 169.1882 7.2818
RIX:CC(017 x 004) f 119.7217 28.9779 176.9642 62.4791
RIX:CC(023 x 047) f 100.4 35.4905 170.5075 30.2925
RIX:CC(026 x 006) f 97.4393 26.8283 150.4356 44.443
RIX:CC(032 x 042) f 122.0656 23.6604 168.8039 75.3272
RIX:CC(035 x 062) f 164.376 44.8924 253.0558 75.6962
RIX:CC(041 x 051) f 125.6415 22.4462 169.9814 81.3016
RIX:CC(042 x 032) f 122.1233 40.9809 203.0765 41.1701
RIX:CC(047 x 023) f 65.466 44.8924 154.1458 0.0
RIX:CC(051 x 041) f 132.6921 26.8283 185.6885 79.6958
RIX:CC(062 x 035) f 144.8233 40.9809 225.7765 63.8701




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA