Project measure / variable:   CSNA01   bw_avg_before

ID, description, units MPD:60277   bw_avg_before   percentage of starting body weight   [%]  average before session  
sucrose study
Data set, strains CSNA01   HMDP   84 strains     sex: m     age: 7-22wks
Procedure body weight
Ontology mappings

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  STRAIN COMPARISON PLOT
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CSNA01 - percentage of starting body weight average before session



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested84 strains
Mean of the strain means89.1   %
Median of the strain means89.0   %
SD of the strain means± 1.80
Coefficient of variation (CV)0.0201
Min–max range of strain means82.0   –   93.0   %
Mean sample size per strain3.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 80 761.442 9.518 1.4738 0.0146
Residuals 217 1401.407 6.4581


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 88.0 0.0   2   0.0 0.0 88.0, 88.0 -0.64
129X1/SvJ m 89.6 2.07   5 0.927 0.0231 87.0, 92.0 0.25
A/J m 89.2 1.92   5 0.86 0.0216 87.0, 92.0 0.03
AKR/J m 88.0 2.83   2   2.0 0.0321 86.0, 90.0 -0.64
AXB15/PgnJ m 91.5 3.54   2   2.5 0.0386 89.0, 94.0 1.31
AXB19a/PgnJ m 89.0 0.0   2   0.0 0.0 89.0, 89.0 -0.08
AXB1/PgnJ m 91.7 8.02   3 4.63 0.0875 84.0, 100.0 1.42
AXB23/PgnJ m 89.5 3.54   2   2.5 0.0395 87.0, 92.0 0.2
BALB/cByJ m 88.8 3.31   6 1.35 0.0373 84.0, 93.0 -0.19
BALB/cJ m 88.1 1.46   7 0.553 0.0166 86.0, 90.0 -0.58
BPL/1J m 91.6 1.52   5 0.678 0.0166 90.0, 93.0 1.37
BTBR T+ Itpr3tf/J m 88.5 0.707   2   0.5 0.00799 88.0, 89.0 -0.36
BUB/BnJ m 89.5 0.707   2   0.5 0.0079 89.0, 90.0 0.2
BXA13/PgnJ m 89.5 2.12   2   1.5 0.0237 88.0, 91.0 0.2
BXA14/PgnJ m 89.2 4.71   5 2.11 0.0528 85.0, 97.0 0.03
BXA16/PgnJ m 91.0 2.16   4 1.08 0.0237 89.0, 94.0 1.03
BXA25/PgnJ m 88.8 2.99   4 1.49 0.0336 85.0, 92.0 -0.19
BXA4/PgnJ m 89.0 0.0   1   0.0 0.0 89.0, 89.0 -0.08
BXD100/RwwJ m 88.0 1.0   3 0.577 0.0114 87.0, 89.0 -0.64
BXD1/TyJ m 89.3 1.53   3 0.882 0.0171 88.0, 91.0 0.08
BXD24/TyJ m 86.0 0.816   4 0.408 0.00949 85.0, 87.0 -1.75
BXD29/Ty m 87.0 0.0   4 0.0 0.0 87.0, 87.0 -1.2
BXD31/TyJ m 88.7 1.86   6 0.76 0.021 87.0, 91.0 -0.25
BXD32/TyJ m 88.0 0.0   2   0.0 0.0 88.0, 88.0 -0.64
BXD39/TyJ m 86.6 0.894   5 0.4 0.0103 86.0, 88.0 -1.42
BXD40/TyJ m 88.5 2.38   4 1.19 0.0269 86.0, 91.0 -0.36
BXD42/TyJ m 90.5 1.69   11 0.511 0.0187 87.0, 93.0 0.75
BXD48a/RwwJ m 86.0 0.0   2   0.0 0.0 86.0, 86.0 -1.75
BXD48/RwwJ m 87.2 1.1   5 0.49 0.0126 86.0, 88.0 -1.08
BXD51/RwwJ m 89.0 1.0   3 0.577 0.0112 88.0, 90.0 -0.08
BXD60/RwwJ m 87.0 1.53   7 0.577 0.0176 86.0, 90.0 -1.2
BXD62/RwwJ m 87.7 3.06   3 1.76 0.0348 85.0, 91.0 -0.81
BXD65/RwwJ m 87.3 2.07   6 0.843 0.0237 85.0, 91.0 -1.03
BXD66/RwwJ m 88.7 0.577   3 0.333 0.00651 88.0, 89.0 -0.25
BXD68/RwwJ m 88.6 1.67   5 0.748 0.0189 86.0, 90.0 -0.3
BXD75/RwwJ m 91.3 3.2   6 1.31 0.0351 87.0, 96.0 1.2
BXD77/RwwJ m 89.7 1.53   3 0.882 0.017 88.0, 91.0 0.31
BXD84/RwwJ m 88.0 2.83   2   2.0 0.0321 86.0, 90.0 -0.64
BXD90/RwwJ m 88.0 1.41   2   1.0 0.0161 87.0, 89.0 -0.64
BXD95/RwwJ m 88.0 1.41   2   1.0 0.0161 87.0, 89.0 -0.64
BXD9/TyJ m 86.8 1.1   5 0.49 0.0126 86.0, 88.0 -1.31
BXH19/TyJ m 91.5 4.95   2   3.5 0.0541 88.0, 95.0 1.31
BXH22/KccJ m 88.4 1.51   8 0.532 0.017 85.0, 90.0 -0.42
BXH4/TyJ m 88.3 3.79   3 2.19 0.0429 84.0, 91.0 -0.47
BXH6/TyJ m 90.3 2.31   3 1.33 0.0256 89.0, 93.0 0.64
BXH8/TyJ m 89.0 5.66   2   4.0 0.0636 85.0, 93.0 -0.08
BXH9/TyJ m 87.0 3.83   4 1.91 0.044 82.0, 90.0 -1.2
C3HeB/FeJ m 86.5 2.12   2   1.5 0.0245 85.0, 88.0 -1.47
C3H/HeJ m 87.8 0.837   5 0.374 0.00953 87.0, 89.0 -0.75
C57BL/10J m 89.5 0.707   2   0.5 0.0079 89.0, 90.0 0.2
C57BL/6J m 88.7 2.24   9 0.745 0.0252 86.0, 92.0 -0.25
C57BLKS/J m 89.0 1.41   2   1.0 0.0159 88.0, 90.0 -0.08
C57L/J m 92.0 0.0   2   0.0 0.0 92.0, 92.0 1.59
C58/J m 91.5 3.7   4 1.85 0.0404 87.0, 96.0 1.31
CAST/EiJ m 89.0 2.0   3 1.15 0.0225 87.0, 91.0 -0.08
CBA/J m 89.6 2.76   7 1.04 0.0308 85.0, 92.0 0.25
CE/J m 89.0 1.41   2   1.0 0.0159 88.0, 90.0 -0.08
CXB11/HiAJ m 92.0 1.41   4 0.707 0.0154 90.0, 93.0 1.59
CXB1/ByJ m 90.8 2.56   6 1.05 0.0282 88.0, 94.0 0.92
CXB8/HiAJ m 93.0 1.41   2   1.0 0.0152 92.0, 94.0 2.15
DBA/1J m 88.5 0.707   2   0.5 0.00799 88.0, 89.0 -0.36
DBA/2J m 90.2 0.983   6 0.401 0.0109 89.0, 91.0 0.59
DDY/JclSidSeyFrkJ m 88.5 2.12   2   1.5 0.024 87.0, 90.0 -0.36
FVB/NJ m 89.0 1.67   6 0.683 0.0188 86.0, 91.0 -0.08
I/LnJ m 91.2 5.22   5 2.33 0.0572 87.0, 99.0 1.14
ILS/IbgTejJ m 92.5 2.08   4 1.04 0.0225 90.0, 95.0 1.87
KK/HlJ m 89.0 1.41   2   1.0 0.0159 88.0, 90.0 -0.08
LG/J m 86.8 1.71   4 0.854 0.0197 85.0, 89.0 -1.31
LP/J m 89.7 3.21   3 1.86 0.0359 86.0, 92.0 0.31
MOLF/EiJ m 90.5 0.707   2   0.5 0.00781 90.0, 91.0 0.75
MRL/MpJ m 87.5 0.707   2   0.5 0.00808 87.0, 88.0 -0.92
NOD/ShiLtJ m 90.2 2.17   5 0.97 0.024 88.0, 93.0 0.59
NON/ShiLtJ m 89.5 0.707   2   0.5 0.0079 89.0, 90.0 0.2
NOR/LtJ m 92.0 5.66   2   4.0 0.0615 88.0, 96.0 1.59
NZB/BlNJ m 89.0 1.41   2   1.0 0.0159 88.0, 90.0 -0.08
NZW/LacJ m 88.5 2.12   2   1.5 0.024 87.0, 90.0 -0.36
P/J m 91.0 1.41   2   1.0 0.0155 90.0, 92.0 1.03
PL/J m 89.5 0.707   2   0.5 0.0079 89.0, 90.0 0.2
PWD/PhJ m 91.0 0.0   1   0.0 0.0 91.0, 91.0 1.03
RIIIS/J m 89.0 2.35   5 1.05 0.0264 85.0, 91.0 -0.08
SEA/GnJ m 90.0 1.41   2   1.0 0.0157 89.0, 91.0 0.47
SJL/J m 91.0 6.52   5 2.92 0.0716 82.0, 100.0 1.03
SM/J m 93.0 0.0   3 0.0 0.0 93.0, 93.0 2.15
ZALENDE/EiJ m 82.0 0.0   1   0.0 0.0 82.0, 82.0 -3.98


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 88.0 1.797 91.5417 84.4583
129X1/SvJ m 89.6 1.1365 91.84 87.36
A/J m 89.2 1.1365 91.44 86.96
AKR/J m 88.0 1.797 91.5417 84.4583
AXB15/PgnJ m 91.5 1.797 95.0417 87.9583
AXB19a/PgnJ m 89.0 1.797 92.5417 85.4583
AXB1/PgnJ m 91.6667 1.4672 94.5585 88.7749
AXB23/PgnJ m 89.5 1.797 93.0417 85.9583
BALB/cByJ m 88.8333 1.0375 90.8781 86.7885
BALB/cJ m 88.1429 0.9605 90.036 86.2497
BPL/1J m 91.6 1.1365 93.84 89.36
BTBR T+ Itpr3tf/J m 88.5 1.797 92.0417 84.9583
BUB/BnJ m 89.5 1.797 93.0417 85.9583
BXA13/PgnJ m 89.5 1.797 93.0417 85.9583
BXA14/PgnJ m 89.2 1.1365 91.44 86.96
BXA16/PgnJ m 91.0 1.2706 93.5044 88.4956
BXA25/PgnJ m 88.75 1.2706 91.2544 86.2456
BXD100/RwwJ m 88.0 1.4672 90.8918 85.1082
BXD1/TyJ m 89.3333 1.4672 92.2251 86.4415
BXD24/TyJ m 86.0 1.2706 88.5044 83.4956
BXD29/Ty m 87.0 1.2706 89.5044 84.4956
BXD31/TyJ m 88.6667 1.0375 90.7115 86.6219
BXD32/TyJ m 88.0 1.797 91.5417 84.4583
BXD39/TyJ m 86.6 1.1365 88.84 84.36
BXD40/TyJ m 88.5 1.2706 91.0044 85.9956
BXD42/TyJ m 90.5455 0.7662 92.0556 89.0353
BXD48a/RwwJ m 86.0 1.797 89.5417 82.4583
BXD48/RwwJ m 87.2 1.1365 89.44 84.96
BXD51/RwwJ m 89.0 1.4672 91.8918 86.1082
BXD60/RwwJ m 87.0 0.9605 88.8931 85.1069
BXD62/RwwJ m 87.6667 1.4672 90.5585 84.7749
BXD65/RwwJ m 87.3333 1.0375 89.3781 85.2885
BXD66/RwwJ m 88.6667 1.4672 91.5585 85.7749
BXD68/RwwJ m 88.6 1.1365 90.84 86.36
BXD75/RwwJ m 91.3333 1.0375 93.3781 89.2885
BXD77/RwwJ m 89.6667 1.4672 92.5585 86.7749
BXD84/RwwJ m 88.0 1.797 91.5417 84.4583
BXD90/RwwJ m 88.0 1.797 91.5417 84.4583
BXD95/RwwJ m 88.0 1.797 91.5417 84.4583
BXD9/TyJ m 86.8 1.1365 89.04 84.56
BXH19/TyJ m 91.5 1.797 95.0417 87.9583
BXH22/KccJ m 88.375 0.8985 90.1459 86.6041
BXH4/TyJ m 88.3333 1.4672 91.2251 85.4415
BXH6/TyJ m 90.3333 1.4672 93.2251 87.4415
BXH8/TyJ m 89.0 1.797 92.5417 85.4583
BXH9/TyJ m 87.0 1.2706 89.5044 84.4956
C3HeB/FeJ m 86.5 1.797 90.0417 82.9583
C3H/HeJ m 87.8 1.1365 90.04 85.56
C57BL/10J m 89.5 1.797 93.0417 85.9583
C57BL/6J m 88.6667 0.8471 90.3362 86.9971
C57BLKS/J m 89.0 1.797 92.5417 85.4583
C57L/J m 92.0 1.797 95.5417 88.4583
C58/J m 91.5 1.2706 94.0044 88.9956
CAST/EiJ m 89.0 1.4672 91.8918 86.1082
CBA/J m 89.5714 0.9605 91.4646 87.6783
CE/J m 89.0 1.797 92.5417 85.4583
CXB11/HiAJ m 92.0 1.2706 94.5044 89.4956
CXB1/ByJ m 90.8333 1.0375 92.8781 88.7885
CXB8/HiAJ m 93.0 1.797 96.5417 89.4583
DBA/1J m 88.5 1.797 92.0417 84.9583
DBA/2J m 90.1667 1.0375 92.2115 88.1219
DDY/JclSidSeyFrkJ m 88.5 1.797 92.0417 84.9583
FVB/NJ m 89.0 1.0375 91.0448 86.9552
I/LnJ m 91.2 1.1365 93.44 88.96
ILS/IbgTejJ m 92.5 1.2706 95.0044 89.9956
KK/HlJ m 89.0 1.797 92.5417 85.4583
LG/J m 86.75 1.2706 89.2544 84.2456
LP/J m 89.6667 1.4672 92.5585 86.7749
MOLF/EiJ m 90.5 1.797 94.0417 86.9583
MRL/MpJ m 87.5 1.797 91.0417 83.9583
NOD/ShiLtJ m 90.2 1.1365 92.44 87.96
NON/ShiLtJ m 89.5 1.797 93.0417 85.9583
NOR/LtJ m 92.0 1.797 95.5417 88.4583
NZB/BlNJ m 89.0 1.797 92.5417 85.4583
NZW/LacJ m 88.5 1.797 92.0417 84.9583
P/J m 91.0 1.797 94.5417 87.4583
PL/J m 89.5 1.797 93.0417 85.9583
RIIIS/J m 89.0 1.1365 91.24 86.76
SEA/GnJ m 90.0 1.797 93.5417 86.4583
SJL/J m 91.0 1.1365 93.24 88.76
SM/J m 93.0 1.4672 95.8918 90.1082




  GWAS USING LINEAR MIXED MODELS