Project measure / variable:   CSNA01   ActivesD1

ID, description, units MPD:60231   ActivesD1   active lever presses, 8 h test   [n]  day 1  
sucrose study
Data set, strains CSNA01   HMDP   91 strains     sex: m     age: 7-22wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA01 - active lever presses, 8 h test day 1



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested91 strains
Mean of the strain means569   n
Median of the strain means327   n
SD of the strain means± 598
Coefficient of variation (CV)1.05
Min–max range of strain means0.800   –   2210   n
Mean sample size per strain3.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 86 95270318.6503 1107794.4029 3.1689 < 0.0001
Residuals 230 80402938.0248 349577.9914


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 3.0 1.41   2   1.0 0.471 2.0, 4.0 -0.95
129X1/SvJ m 0.8 0.837   5 0.374 1.05 -0.95
A/J m 457.0 486.0   5 217.0 1.06 35.0, 1186.0 -0.19
AKR/J m 78.0 102.0   2   72.0 1.31 6.0, 150.0 -0.82
AXB15/PgnJ m 4.0 1.41   2   1.0 0.354 3.0, 5.0 -0.94
AXB19a/PgnJ m 3.0 4.24   2   3.0 1.41 -0.95
AXB1/PgnJ m 119.0 145.0   3 83.9 1.22 22.0, 286.0 -0.75
AXB23/PgnJ m 9.5 10.6   2   7.5 1.12 2.0, 17.0 -0.94
AXB6/PgnJ m 468.0 0.0   1   0.0 0.0 468.0, 468.0 -0.17
AXB8/PgnJ m 116.0 197.0   3 114.0 1.69 2.0, 344.0 -0.76
BALB/cByJ m 1216.0 946.0   6 386.0 0.778 7.0, 2171.0 1.08
BALB/cJ m 1433.0 1031.0   7 390.0 0.72 4.0, 2252.0 1.44
BPL/1J m 638.0 460.0   5 206.0 0.72 6.0, 1175.0 0.12
BTBR T+ Itpr3tf/J m 267.0 531.0   4 266.0 1.99 -0.5
BUB/BnJ m 704.0 535.0   2   378.0 0.76 326.0, 1083.0 0.23
BXA13/PgnJ m 1706.0 8.49   2   6.0 0.00497 1700.0, 1712.0 1.9
BXA14/PgnJ m 79.2 168.0   5 75.2 2.12 -0.82
BXA16/PgnJ m 4.75 1.71   4 0.854 0.36 3.0, 7.0 -0.94
BXA25/PgnJ m 3.0 1.63   4 0.816 0.544 1.0, 5.0 -0.95
BXA4/PgnJ m 4.0 0.0   1   0.0 0.0 4.0, 4.0 -0.94
BXA7/PgnJ m 2210.0 22.8   3 13.2 0.0103 2190.0, 2235.0 2.74
BXD100/RwwJ m 158.0 138.0   3 79.8 0.876 5.0, 274.0 -0.69
BXD1/TyJ m 62.7 103.0   3 59.7 1.65 1.0, 182.0 -0.85
BXD24/TyJ m 320.0 443.0   4 221.0 1.39 24.0, 978.0 -0.42
BXD29/Ty m 4.75 2.87   4 1.44 0.605 3.0, 9.0 -0.94
BXD31/TyJ m 694.0 1073.0   6 438.0 1.55 0.21
BXD32/TyJ m 151.0 211.0   2   149.0 1.4 2.0, 300.0 -0.7
BXD39/TyJ m 3.4 2.79   5 1.25 0.821 1.0, 8.0 -0.95
BXD40/TyJ m 1294.0 862.0   4 431.0 0.667 4.0, 1805.0 1.21
BXD42/TyJ m 829.0 766.0   11 231.0 0.923 0.43
BXD48a/RwwJ m 1716.0 156.0   2   110.0 0.0911 1605.0, 1826.0 1.92
BXD48/RwwJ m 309.0 523.0   5 234.0 1.69 -0.43
BXD51/RwwJ m 1064.0 879.0   3 508.0 0.826 138.0, 1887.0 0.83
BXD60/RwwJ m 218.0 321.0   7 121.0 1.47 2.0, 908.0 -0.59
BXD62/RwwJ m 435.0 512.0   3 296.0 1.18 18.0, 1006.0 -0.22
BXD65/RwwJ m 399.0 632.0   6 258.0 1.58 4.0, 1633.0 -0.28
BXD66/RwwJ m 7.67 2.31   3 1.33 0.301 5.0, 9.0 -0.94
BXD68/RwwJ m 314.0 693.0   5 310.0 2.2 4.0, 1554.0 -0.43
BXD75/RwwJ m 656.0 647.0   6 264.0 0.986 5.0, 1898.0 0.15
BXD77/RwwJ m 90.7 148.0   3 85.2 1.63 2.0, 261.0 -0.8
BXD84/RwwJ m 339.0 665.0   4 333.0 1.96 1.0, 1337.0 -0.38
BXD90/RwwJ m 32.5 46.0   2   32.5 1.41 -0.9
BXD95/RwwJ m 26.0 22.6   2   16.0 0.87 10.0, 42.0 -0.91
BXD9/TyJ m 1012.0 464.0   5 207.0 0.458 638.0, 1568.0 0.74
BXH19/TyJ m 148.0 204.0   2   144.0 1.38 4.0, 293.0 -0.7
BXH22/KccJ m 16.0 36.2   8 12.8 2.27 -0.92
BXH4/TyJ m 8.33 11.9   3 6.89 1.43 -0.94
BXH6/TyJ m 860.0 850.0   3 491.0 0.988 1.0, 1700.0 0.49
BXH8/TyJ m 5.0 4.24   2   3.0 0.849 2.0, 8.0 -0.94
BXH9/TyJ m 622.0 327.0   4 164.0 0.526 198.0, 899.0 0.09
C3HeB/FeJ m 4.5 0.707   2   0.5 0.157 4.0, 5.0 -0.94
C3H/HeJ m 93.2 198.0   5 88.5 2.12 4.0, 447.0 -0.8
C57BL/10J m 1289.0 491.0   2   347.0 0.381 942.0, 1636.0 1.2
C57BL/6J m 316.0 616.0   9 205.0 1.95 2.0, 1487.0 -0.42
C57BLKS/J m 1088.0 702.0   2   496.0 0.645 592.0, 1585.0 0.87
C57BR/cdJ m 942.0 809.0   3 467.0 0.859 17.0, 1519.0 0.62
C57L/J m 1826.0 517.0   2   365.0 0.283 1461.0, 2192.0 2.1
C58/J m 772.0 757.0   4 378.0 0.981 38.0, 1521.0 0.34
CAST/EiJ m 327.0 174.0   3 101.0 0.534 138.0, 482.0 -0.4
CBA/J m 335.0 754.0   7 285.0 2.25 1.0, 2029.0 -0.39
CE/J m 1748.0 229.0   2   162.0 0.131 1586.0, 1910.0 1.97
CXB11/HiAJ m 1400.0 596.0   4 298.0 0.426 854.0, 2125.0 1.39
CXB1/ByJ m 204.0 427.0   6 174.0 2.09 -0.61
CXB8/HiAJ m 1214.0 587.0   2   415.0 0.483 799.0, 1629.0 1.08
CXB9/HiAJ m 1687.0 776.0   2   549.0 0.46 1138.0, 2236.0 1.87
DBA/1J m 5.5 3.54   2   2.5 0.643 3.0, 8.0 -0.94
DBA/2J m 445.0 693.0   5 310.0 1.56 8.0, 1600.0 -0.21
DDY/JclSidSeyFrkJ m 1021.0 1416.0   2   1001.0 1.39 20.0, 2022.0 0.76
FVB/NJ m 798.0 1220.0   6 498.0 1.53 4.0, 2448.0 0.38
I/LnJ m 1187.0 1087.0   5 486.0 0.916 2.0, 2180.0 1.03
ILS/IbgTejJ m 1534.0 607.0   4 303.0 0.395 965.0, 2214.0 1.61
KK/HlJ m 874.0 721.0   2   510.0 0.825 364.0, 1383.0 0.51
LG/J m 367.0 137.0   4 68.7 0.375 182.0, 494.0 -0.34
LP/J m 241.0 408.0   3 235.0 1.69 3.0, 712.0 -0.55
MA/MyJ m 293.0 494.0   3 285.0 1.68 2.0, 863.0 -0.46
MOLF/EiJ m 12.0 12.7   2   9.0 1.06 3.0, 21.0 -0.93
MRL/MpJ m 2158.0 85.6   2   60.5 0.0397 2097.0, 2218.0 2.66
NOD/ShiLtJ m 1660.0 758.0   5 339.0 0.456 327.0, 2098.0 1.82
NON/ShiLtJ m 1981.0 250.0   2   177.0 0.126 1804.0, 2158.0 2.36
NOR/LtJ m 1075.0 611.0   2   432.0 0.568 643.0, 1507.0 0.85
NZB/BlNJ m 788.0 1068.0   2   756.0 1.36 32.0, 1543.0 0.37
NZW/LacJ m 696.0 735.0   2   520.0 1.06 176.0, 1216.0 0.21
P/J m 162.0 199.0   2   141.0 1.23 21.0, 303.0 -0.68
PL/J m 206.0 286.0   2   202.0 1.39 4.0, 409.0 -0.61
PWD/PhJ m 196.0 0.0   1   0.0 0.0 196.0, 196.0 -0.62
RIIIS/J m 408.0 265.0   5 119.0 0.651 139.0, 831.0 -0.27
SEA/GnJ m 283.0 310.0   2   219.0 1.09 64.0, 502.0 -0.48
SJL/J m 7.4 3.51   5 1.57 0.474 4.0, 13.0 -0.94
SM/J m 722.0 632.0   3 365.0 0.875 38.0, 1284.0 0.26
SWR/J m 3.5 2.12   2   1.5 0.606 2.0, 5.0 -0.95
ZALENDE/EiJ m 100.0 0.0   1   0.0 0.0 100.0, 100.0 -0.78


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 3.0 418.0777 826.7519 0.0
129X1/SvJ m 0.8 264.4156 521.7864 0.0
A/J m 456.8 264.4156 977.7864 0.0
AKR/J m 78.0 418.0777 901.7519 0.0
AXB15/PgnJ m 4.0 418.0777 827.7519 0.0
AXB19a/PgnJ m 3.0 418.0777 826.7519 0.0
AXB1/PgnJ m 119.0 341.359 791.5906 0.0
AXB23/PgnJ m 9.5 418.0777 833.2519 0.0
AXB8/PgnJ m 116.3333 341.359 788.9239 0.0
BALB/cByJ m 1215.8333 241.3773 1691.4267 740.24
BALB/cJ m 1432.5714 223.472 1872.8853 992.2575
BPL/1J m 638.4 264.4156 1159.3864 117.4136
BTBR T+ Itpr3tf/J m 267.0 295.6256 849.4805 0.0
BUB/BnJ m 704.5 418.0777 1528.2519 0.0
BXA13/PgnJ m 1706.0 418.0777 2529.7519 882.2481
BXA14/PgnJ m 79.2 264.4156 600.1864 0.0
BXA16/PgnJ m 4.75 295.6256 587.2305 0.0
BXA25/PgnJ m 3.0 295.6256 585.4805 0.0
BXA7/PgnJ m 2210.3333 341.359 2882.9239 1537.7428
BXD100/RwwJ m 157.6667 341.359 830.2572 0.0
BXD1/TyJ m 62.6667 341.359 735.2572 0.0
BXD24/TyJ m 319.75 295.6256 902.2305 0.0
BXD29/Ty m 4.75 295.6256 587.2305 0.0
BXD31/TyJ m 693.5 241.3773 1169.0934 217.9066
BXD32/TyJ m 151.0 418.0777 974.7519 0.0
BXD39/TyJ m 3.4 264.4156 524.3864 0.0
BXD40/TyJ m 1294.0 295.6256 1876.4805 711.5195
BXD42/TyJ m 829.3636 178.2689 1180.6126 478.1147
BXD48a/RwwJ m 1715.5 418.0777 2539.2519 891.7481
BXD48/RwwJ m 308.8 264.4156 829.7864 0.0
BXD51/RwwJ m 1064.3333 341.359 1736.9239 391.7428
BXD60/RwwJ m 218.4286 223.472 658.7425 0.0
BXD62/RwwJ m 434.6667 341.359 1107.2572 0.0
BXD65/RwwJ m 399.0 241.3773 874.5934 0.0
BXD66/RwwJ m 7.6667 341.359 680.2572 0.0
BXD68/RwwJ m 314.4 264.4156 835.3864 0.0
BXD75/RwwJ m 655.6667 241.3773 1131.26 180.0733
BXD77/RwwJ m 90.6667 341.359 763.2572 0.0
BXD84/RwwJ m 339.25 295.6256 921.7305 0.0
BXD90/RwwJ m 32.5 418.0777 856.2519 0.0
BXD95/RwwJ m 26.0 418.0777 849.7519 0.0
BXD9/TyJ m 1011.6 264.4156 1532.5864 490.6136
BXH19/TyJ m 148.5 418.0777 972.2519 0.0
BXH22/KccJ m 16.0 209.0389 427.8759 0.0
BXH4/TyJ m 8.3333 341.359 680.9239 0.0
BXH6/TyJ m 860.0 341.359 1532.5906 187.4094
BXH8/TyJ m 5.0 418.0777 828.7519 0.0
BXH9/TyJ m 622.25 295.6256 1204.7305 39.7695
C3HeB/FeJ m 4.5 418.0777 828.2519 0.0
C3H/HeJ m 93.2 264.4156 614.1864 0.0
C57BL/10J m 1289.0 418.0777 2112.7519 465.2481
C57BL/6J m 316.2222 197.0837 704.5426 0.0
C57BLKS/J m 1088.5 418.0777 1912.2519 264.7481
C57BR/cdJ m 941.6667 341.359 1614.2572 269.0761
C57L/J m 1826.5 418.0777 2650.2519 1002.7481
C58/J m 771.75 295.6256 1354.2305 189.2695
CAST/EiJ m 326.6667 341.359 999.2572 0.0
CBA/J m 335.2857 223.472 775.5996 0.0
CE/J m 1748.0 418.0777 2571.7519 924.2481
CXB11/HiAJ m 1399.75 295.6256 1982.2305 817.2695
CXB1/ByJ m 204.1667 241.3773 679.76 0.0
CXB8/HiAJ m 1214.0 418.0777 2037.7519 390.2481
CXB9/HiAJ m 1687.0 418.0777 2510.7519 863.2481
DBA/1J m 5.5 418.0777 829.2519 0.0
DBA/2J m 445.4 264.4156 966.3864 0.0
DDY/JclSidSeyFrkJ m 1021.0 418.0777 1844.7519 197.2481
FVB/NJ m 797.5 241.3773 1273.0934 321.9066
I/LnJ m 1186.8 264.4156 1707.7864 665.8136
ILS/IbgTejJ m 1534.5 295.6256 2116.9805 952.0195
KK/HlJ m 873.5 418.0777 1697.2519 49.7481
LG/J m 366.75 295.6256 949.2305 0.0
LP/J m 241.3333 341.359 913.9239 0.0
MA/MyJ m 293.0 341.359 965.5906 0.0
MOLF/EiJ m 12.0 418.0777 835.7519 0.0
MRL/MpJ m 2157.5 418.0777 2981.2519 1333.7481
NOD/ShiLtJ m 1660.4 264.4156 2181.3864 1139.4136
NON/ShiLtJ m 1981.0 418.0777 2804.7519 1157.2481
NOR/LtJ m 1075.0 418.0777 1898.7519 251.2481
NZB/BlNJ m 787.5 418.0777 1611.2519 0.0
NZW/LacJ m 696.0 418.0777 1519.7519 0.0
P/J m 162.0 418.0777 985.7519 0.0
PL/J m 206.5 418.0777 1030.2519 0.0
RIIIS/J m 407.6 264.4156 928.5864 0.0
SEA/GnJ m 283.0 418.0777 1106.7519 0.0
SJL/J m 7.4 264.4156 528.3864 0.0
SM/J m 721.6667 341.359 1394.2572 49.0761
SWR/J m 3.5 418.0777 827.2519 0.0




  GWAS USING LINEAR MIXED MODELS