Project measure / variable:   CSNA01   VR5rateD1

ID, description, units MPD:60226   VR5rateD1   variable ratio 5 (VR5), lever press rate, 8 h test   [n/s]  day 1  
sucrose study
Data set, strains CSNA01   HMDP   91 strains     sex: m     age: 7-22wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA01 - variable ratio 5 (VR5), lever press rate, 8 h test day 1



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested91 strains
Mean of the strain means0.0268   n/s
Median of the strain means0.0205   n/s
SD of the strain means± 0.0264
Coefficient of variation (CV)0.984
Min–max range of strain means0   –   0.0878   n/s
Mean sample size per strain3.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 86 0.2034 0.0024 2.6674 < 0.0001
Residuals 230 0.204 0.0009


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 0.0 0.0   2   0.0 0.0 -1.02
129X1/SvJ m 0.0 0.0   5 0.0 0.0 -1.02
A/J m 0.0207 0.0219   5 0.00978 1.05 -0.23
AKR/J m 0.0 0.0   2   0.0 0.0 -1.02
AXB15/PgnJ m 0.0 0.0   2   0.0 0.0 -1.02
AXB19a/PgnJ m 0.0 0.0   2   0.0 0.0 -1.02
AXB1/PgnJ m 0.00262 0.00454   3 0.00262 1.73 -0.92
AXB23/PgnJ m 0.0 0.0   2   0.0 0.0 -1.02
AXB6/PgnJ m 0.0187 0.0   1   0.0 0.0 0.0187, 0.0187 -0.31
AXB8/PgnJ m 0.00311 0.00539   3 0.00311 1.73 -0.9
BALB/cByJ m 0.0787 0.0439   6 0.0179 0.558 1.97
BALB/cJ m 0.0878 0.0672   7 0.0254 0.766 2.31
BPL/1J m 0.0236 0.0181   5 0.00809 0.767 -0.12
BTBR T+ Itpr3tf/J m 0.00965 0.0193   4 0.00965 2.0 -0.65
BUB/BnJ m 0.0212 0.0205   2   0.0145 0.966 0.00673, 0.0357 -0.21
BXA13/PgnJ m 0.0872 0.0237   2   0.0168 0.271 0.0705, 0.104 2.29
BXA14/PgnJ m 0.00308 0.00689   5 0.00308 2.24 -0.9
BXA16/PgnJ m 0.0 0.0   4 0.0 0.0 -1.02
BXA25/PgnJ m 0.0 0.0   4 0.0 0.0 -1.02
BXA4/PgnJ m 0.0 0.0   1   0.0 0.0 -1.02
BXA7/PgnJ m 0.0854 0.000436   3 0.000252 0.0051 0.0851, 0.0859 2.22
BXD100/RwwJ m 0.0145 0.0169   3 0.00973 1.16 -0.47
BXD1/TyJ m 0.0037 0.00641   3 0.0037 1.73 -0.88
BXD24/TyJ m 0.0249 0.0382   4 0.0191 1.53 -0.07
BXD29/Ty m 0.0 0.0   4 0.0 0.0 -1.02
BXD31/TyJ m 0.0288 0.0447   6 0.0183 1.55 0.08
BXD32/TyJ m 0.0331 0.0467   2   0.0331 1.41 0.24
BXD39/TyJ m 0.0 0.0   5 0.0 0.0 -1.02
BXD40/TyJ m 0.0494 0.033   4 0.0165 0.669 0.86
BXD42/TyJ m 0.0396 0.0346   11 0.0104 0.874 0.49
BXD48a/RwwJ m 0.0683 0.00742   2   0.00525 0.109 0.0631, 0.0736 1.57
BXD48/RwwJ m 0.0127 0.0196   5 0.00878 1.54 -0.53
BXD51/RwwJ m 0.0469 0.0408   3 0.0236 0.871 0.76
BXD60/RwwJ m 0.019 0.0229   7 0.00865 1.21 -0.3
BXD62/RwwJ m 0.0344 0.03   3 0.0173 0.872 0.29
BXD65/RwwJ m 0.0124 0.0228   6 0.00931 1.84 -0.55
BXD66/RwwJ m 0.0 0.0   3 0.0 0.0 -1.02
BXD68/RwwJ m 0.0146 0.0326   5 0.0146 2.24 -0.46
BXD75/RwwJ m 0.0332 0.0248   6 0.0101 0.746 0.24
BXD77/RwwJ m 0.0152 0.0263   3 0.0152 1.73 -0.44
BXD84/RwwJ m 0.0135 0.027   4 0.0135 2.0 -0.5
BXD90/RwwJ m 0.0 0.0   2   0.0 0.0 -1.02
BXD95/RwwJ m 0.0 0.0   2   0.0 0.0 -1.02
BXD9/TyJ m 0.0482 0.027   5 0.0121 0.56 0.0224, 0.0805 0.81
BXH19/TyJ m 0.0141 0.02   2   0.0141 1.41 -0.48
BXH22/KccJ m 0.0 0.0   8 0.0 0.0 -1.02
BXH4/TyJ m 0.0 0.0   3 0.0 0.0 -1.02
BXH6/TyJ m 0.0355 0.0313   3 0.018 0.88 0.33
BXH8/TyJ m 0.0 0.0   2   0.0 0.0 -1.02
BXH9/TyJ m 0.0502 0.04   4 0.02 0.799 0.0165, 0.107 0.89
C3HeB/FeJ m 0.0 0.0   2   0.0 0.0 -1.02
C3H/HeJ m 0.00768 0.0172   5 0.00768 2.24 -0.72
C57BL/10J m 0.0467 0.0149   2   0.0105 0.319 0.0362, 0.0573 0.75
C57BL/6J m 0.0137 0.0272   9 0.00906 1.98 -0.5
C57BLKS/J m 0.0576 0.00354   2   0.0025 0.0614 0.0551, 0.0601 1.17
C57BR/cdJ m 0.0329 0.029   3 0.0167 0.881 0.23
C57L/J m 0.0678 0.0247   2   0.0175 0.365 0.0503, 0.0853 1.55
C58/J m 0.0362 0.028   4 0.014 0.773 0.36
CAST/EiJ m 0.0256 0.0236   3 0.0136 0.922 -0.05
CBA/J m 0.0289 0.051   7 0.0193 1.76 0.08
CE/J m 0.0608 0.00721   2   0.0051 0.119 0.0557, 0.0659 1.29
CXB11/HiAJ m 0.0784 0.0196   4 0.0098 0.25 0.0561, 0.103 1.96
CXB1/ByJ m 0.0242 0.0592   6 0.0242 2.45 -0.1
CXB8/HiAJ m 0.0416 0.0219   2   0.0155 0.527 0.0261, 0.0571 0.56
CXB9/HiAJ m 0.0593 0.0288   2   0.0204 0.487 0.0389, 0.0797 1.23
DBA/1J m 0.0 0.0   2   0.0 0.0 -1.02
DBA/2J m 0.0244 0.0335   5 0.015 1.37 -0.09
DDY/JclSidSeyFrkJ m 0.044 0.0622   2   0.0439 1.41 0.65
FVB/NJ m 0.0359 0.0575   6 0.0235 1.6 0.35
I/LnJ m 0.0423 0.0391   5 0.0175 0.926 0.59
ILS/IbgTejJ m 0.0739 0.0118   4 0.0059 0.16 0.0612, 0.0874 1.79
KK/HlJ m 0.0292 0.0296   2   0.0209 1.01 0.0083, 0.0501 0.09
LG/J m 0.0274 0.0311   4 0.0156 1.14 0.00848, 0.074 0.02
LP/J m 0.0205 0.0354   3 0.0205 1.73 -0.24
MA/MyJ m 0.0138 0.0238   3 0.0138 1.73 -0.49
MOLF/EiJ m 0.0 0.0   2   0.0 0.0 -1.02
MRL/MpJ m 0.0844 0.0012   2   0.00085 0.0142 0.0836, 0.0853 2.18
NOD/ShiLtJ m 0.0693 0.0202   5 0.00904 0.292 0.0355, 0.088 1.61
NON/ShiLtJ m 0.0848 0.00304   2   0.00215 0.0358 0.0827, 0.087 2.2
NOR/LtJ m 0.0534 7.07107e-05   2   5e-05 0.00133 0.0533, 0.0534 1.01
NZB/BlNJ m 0.028 0.0397   2   0.028 1.41 0.05
NZW/LacJ m 0.0721 0.00184   2   0.0013 0.0255 0.0708, 0.0734 1.72
P/J m 0.00635 0.00898   2   0.00635 1.41 -0.78
PL/J m 0.00915 0.0129   2   0.00915 1.41 -0.67
PWD/PhJ m 0.0144 0.0   1   0.0 0.0 0.0144, 0.0144 -0.47
RIIIS/J m 0.0147 0.0117   5 0.00524 0.799 -0.46
SEA/GnJ m 0.0113 0.016   2   0.0113 1.41 -0.59
SJL/J m 0.0 0.0   5 0.0 0.0 -1.02
SM/J m 0.0436 0.0437   3 0.0252 1.0 0.64
SWR/J m 0.0 0.0   2   0.0 0.0 -1.02
ZALENDE/EiJ m 0.0 0.0   1   0.0 0.0 -1.02


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.0 0.0211 0.0415 -0.0415
129X1/SvJ m 0.0 0.0133 0.0262 -0.0262
A/J m 0.0207 0.0133 0.047 -0.0055
AKR/J m 0.0 0.0211 0.0415 -0.0415
AXB15/PgnJ m 0.0 0.0211 0.0415 -0.0415
AXB19a/PgnJ m 0.0 0.0211 0.0415 -0.0415
AXB1/PgnJ m 0.0026 0.0172 0.0365 -0.0313
AXB23/PgnJ m 0.0 0.0211 0.0415 -0.0415
AXB8/PgnJ m 0.0031 0.0172 0.037 -0.0308
BALB/cByJ m 0.0787 0.0122 0.1026 0.0547
BALB/cJ m 0.0878 0.0113 0.11 0.0657
BPL/1J m 0.0236 0.0133 0.0498 -0.0027
BTBR T+ Itpr3tf/J m 0.0097 0.0149 0.039 -0.0197
BUB/BnJ m 0.0212 0.0211 0.0627 -0.0203
BXA13/PgnJ m 0.0873 0.0211 0.1287 0.0458
BXA14/PgnJ m 0.0031 0.0133 0.0293 -0.0232
BXA16/PgnJ m 0.0 0.0149 0.0293 -0.0293
BXA25/PgnJ m 0.0 0.0149 0.0293 -0.0293
BXA7/PgnJ m 0.0854 0.0172 0.1193 0.0515
BXD100/RwwJ m 0.0145 0.0172 0.0484 -0.0194
BXD1/TyJ m 0.0037 0.0172 0.0376 -0.0302
BXD24/TyJ m 0.0249 0.0149 0.0542 -0.0044
BXD29/Ty m 0.0 0.0149 0.0293 -0.0293
BXD31/TyJ m 0.0288 0.0122 0.0528 0.0049
BXD32/TyJ m 0.033 0.0211 0.0745 -0.0084
BXD39/TyJ m 0.0 0.0133 0.0262 -0.0262
BXD40/TyJ m 0.0494 0.0149 0.0787 0.02
BXD42/TyJ m 0.0396 0.009 0.0573 0.022
BXD48a/RwwJ m 0.0683 0.0211 0.1098 0.0269
BXD48/RwwJ m 0.0127 0.0133 0.039 -0.0135
BXD51/RwwJ m 0.0469 0.0172 0.0808 0.013
BXD60/RwwJ m 0.019 0.0113 0.0411 -0.0032
BXD62/RwwJ m 0.0344 0.0172 0.0683 0.0005
BXD65/RwwJ m 0.0124 0.0122 0.0364 -0.0115
BXD66/RwwJ m 0.0 0.0172 0.0339 -0.0339
BXD68/RwwJ m 0.0146 0.0133 0.0408 -0.0116
BXD75/RwwJ m 0.0332 0.0122 0.0571 0.0092
BXD77/RwwJ m 0.0152 0.0172 0.0491 -0.0187
BXD84/RwwJ m 0.0135 0.0149 0.0428 -0.0158
BXD90/RwwJ m 0.0 0.0211 0.0415 -0.0415
BXD95/RwwJ m 0.0 0.0211 0.0415 -0.0415
BXD9/TyJ m 0.0482 0.0133 0.0744 0.0219
BXH19/TyJ m 0.0141 0.0211 0.0556 -0.0273
BXH22/KccJ m 0.0 0.0105 0.0207 -0.0207
BXH4/TyJ m 0.0 0.0172 0.0339 -0.0339
BXH6/TyJ m 0.0355 0.0172 0.0694 0.0017
BXH8/TyJ m 0.0 0.0211 0.0415 -0.0415
BXH9/TyJ m 0.0501 0.0149 0.0795 0.0208
C3HeB/FeJ m 0.0 0.0211 0.0415 -0.0415
C3H/HeJ m 0.0077 0.0133 0.0339 -0.0186
C57BL/10J m 0.0467 0.0211 0.0882 0.0053
C57BL/6J m 0.0137 0.0099 0.0333 -0.0059
C57BLKS/J m 0.0576 0.0211 0.0991 0.0161
C57BR/cdJ m 0.0329 0.0172 0.0668 -0.0009
C57L/J m 0.0678 0.0211 0.1093 0.0263
C58/J m 0.0362 0.0149 0.0655 0.0068
CAST/EiJ m 0.0256 0.0172 0.0595 -0.0083
CBA/J m 0.0289 0.0113 0.0511 0.0068
CE/J m 0.0608 0.0211 0.1023 0.0193
CXB11/HiAJ m 0.0784 0.0149 0.1078 0.0491
CXB1/ByJ m 0.0242 0.0122 0.0481 0.0002
CXB8/HiAJ m 0.0416 0.0211 0.0831 0.0001
CXB9/HiAJ m 0.0593 0.0211 0.1008 0.0178
DBA/1J m 0.0 0.0211 0.0415 -0.0415
DBA/2J m 0.0244 0.0133 0.0507 -0.0018
DDY/JclSidSeyFrkJ m 0.0439 0.0211 0.0854 0.0025
FVB/NJ m 0.0359 0.0122 0.0599 0.0119
I/LnJ m 0.0423 0.0133 0.0685 0.016
ILS/IbgTejJ m 0.0739 0.0149 0.1032 0.0445
KK/HlJ m 0.0292 0.0211 0.0707 -0.0123
LG/J m 0.0274 0.0149 0.0568 -0.0019
LP/J m 0.0205 0.0172 0.0543 -0.0134
MA/MyJ m 0.0138 0.0172 0.0476 -0.0201
MOLF/EiJ m 0.0 0.0211 0.0415 -0.0415
MRL/MpJ m 0.0844 0.0211 0.1259 0.043
NOD/ShiLtJ m 0.0693 0.0133 0.0955 0.043
NON/ShiLtJ m 0.0848 0.0211 0.1263 0.0434
NOR/LtJ m 0.0533 0.0211 0.0948 0.0119
NZB/BlNJ m 0.028 0.0211 0.0695 -0.0134
NZW/LacJ m 0.0721 0.0211 0.1136 0.0306
P/J m 0.0063 0.0211 0.0478 -0.0351
PL/J m 0.0091 0.0211 0.0506 -0.0323
RIIIS/J m 0.0147 0.0133 0.0409 -0.0116
SEA/GnJ m 0.0113 0.0211 0.0528 -0.0302
SJL/J m 0.0 0.0133 0.0262 -0.0262
SM/J m 0.0436 0.0172 0.0774 0.0097
SWR/J m 0.0 0.0211 0.0415 -0.0415




  GWAS USING LINEAR MIXED MODELS