Project measure / variable:   CSNA01   VR5activeD3

ID, description, units MPD:60223   VR5activeD3   variable ratio 5 (VR5), active lever presses, 8 h test   [n]  day 3  
sucrose study
Data set, strains CSNA01   HMDP   91 strains     sex: m     age: 7-22wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA01 - variable ratio 5 (VR5), active lever presses, 8 h test day 3



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested91 strains
Mean of the strain means752   n
Median of the strain means573   n
SD of the strain means± 673
Coefficient of variation (CV)0.895
Min–max range of strain means0   –   2279   n
Mean sample size per strain3.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 86 129202084.4396 1502349.8191 3.6735 < 0.0001
Residuals 230 94062600.9421 408967.8302


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 0.0 0.0   2   0.0 0.0 -1.12
129X1/SvJ m 0.0 0.0   5 0.0 0.0 -1.12
A/J m 934.0 737.0   5 329.0 0.789 126.0, 1838.0 0.27
AKR/J m 64.0 26.9   2   19.0 0.42 45.0, 83.0 -1.02
AXB15/PgnJ m 0.0 0.0   2   0.0 0.0 -1.12
AXB19a/PgnJ m 0.0 0.0   2   0.0 0.0 -1.12
AXB1/PgnJ m 204.0 236.0   3 136.0 1.15 -0.81
AXB23/PgnJ m 0.0 0.0   2   0.0 0.0 -1.12
AXB6/PgnJ m 82.0 0.0   1   0.0 0.0 82.0, 82.0 -1.0
AXB8/PgnJ m 198.0 343.0   3 198.0 1.73 -0.82
BALB/cByJ m 2007.0 3.74   6 1.53 0.00186 2002.0, 2013.0 1.86
BALB/cJ m 1893.0 362.0   7 137.0 0.191 1074.0, 2070.0 1.69
BPL/1J m 575.0 369.0   5 165.0 0.643 -0.26
BTBR T+ Itpr3tf/J m 489.0 978.0   4 489.0 2.0 -0.39
BUB/BnJ m 804.0 670.0   2   474.0 0.834 330.0, 1278.0 0.08
BXA13/PgnJ m 2279.0 188.0   2   133.0 0.0825 2146.0, 2412.0 2.27
BXA14/PgnJ m 239.0 346.0   5 155.0 1.45 -0.76
BXA16/PgnJ m 0.0 0.0   4 0.0 0.0 -1.12
BXA25/PgnJ m 0.0 0.0   4 0.0 0.0 -1.12
BXA4/PgnJ m 0.0 0.0   1   0.0 0.0 -1.12
BXA7/PgnJ m 2032.0 24.8   3 14.3 0.0122 2014.0, 2060.0 1.9
BXD100/RwwJ m 267.0 321.0   3 185.0 1.2 -0.72
BXD1/TyJ m 537.0 930.0   3 537.0 1.73 -0.32
BXD24/TyJ m 144.0 82.6   4 41.3 0.573 52.0, 251.0 -0.9
BXD29/Ty m 87.0 174.0   4 87.0 2.0 -0.99
BXD31/TyJ m 706.0 1089.0   6 445.0 1.54 -0.07
BXD32/TyJ m 778.0 1100.0   2   777.0 1.41 0.04
BXD39/TyJ m 0.0 0.0   5 0.0 0.0 -1.12
BXD40/TyJ m 952.0 712.0   4 356.0 0.747 0.3
BXD42/TyJ m 891.0 737.0   11 222.0 0.828 0.21
BXD48a/RwwJ m 1951.0 19.8   2   14.0 0.0101 1937.0, 1965.0 1.78
BXD48/RwwJ m 584.0 829.0   5 371.0 1.42 -0.25
BXD51/RwwJ m 1681.0 548.0   3 317.0 0.326 1048.0, 2013.0 1.38
BXD60/RwwJ m 673.0 864.0   7 327.0 1.28 -0.12
BXD62/RwwJ m 1072.0 350.0   3 202.0 0.326 795.0, 1465.0 0.47
BXD65/RwwJ m 270.0 398.0   6 163.0 1.48 -0.72
BXD66/RwwJ m 265.0 459.0   3 265.0 1.73 -0.72
BXD68/RwwJ m 411.0 918.0   5 411.0 2.24 -0.51
BXD75/RwwJ m 550.0 644.0   6 263.0 1.17 -0.3
BXD77/RwwJ m 162.0 280.0   3 162.0 1.73 -0.88
BXD84/RwwJ m 524.0 1048.0   4 524.0 2.0 -0.34
BXD90/RwwJ m 398.0 562.0   2   397.0 1.41 -0.53
BXD95/RwwJ m 570.0 807.0   2   570.0 1.41 -0.27
BXD9/TyJ m 1091.0 504.0   5 225.0 0.462 481.0, 1867.0 0.5
BXH19/TyJ m 89.5 127.0   2   89.5 1.41 -0.98
BXH22/KccJ m 14.0 39.6   8 14.0 2.83 -1.1
BXH4/TyJ m 0.0 0.0   3 0.0 0.0 -1.12
BXH6/TyJ m 1390.0 893.0   3 516.0 0.642 385.0, 2091.0 0.95
BXH8/TyJ m 1038.0 1469.0   2   1038.0 1.41 0.42
BXH9/TyJ m 842.0 668.0   4 334.0 0.793 144.0, 1716.0 0.13
C3HeB/FeJ m 228.0 322.0   2   227.0 1.41 -0.78
C3H/HeJ m 486.0 882.0   5 394.0 1.81 -0.4
C57BL/10J m 1726.0 482.0   2   341.0 0.279 1385.0, 2067.0 1.45
C57BL/6J m 574.0 701.0   9 234.0 1.22 -0.26
C57BLKS/J m 1314.0 1059.0   2   748.0 0.806 565.0, 2062.0 0.83
C57BR/cdJ m 1778.0 295.0   3 170.0 0.166 1486.0, 2076.0 1.52
C57L/J m 1976.0 67.2   2   47.5 0.034 1928.0, 2023.0 1.82
C58/J m 901.0 790.0   4 395.0 0.876 222.0, 1793.0 0.22
CAST/EiJ m 719.0 335.0   3 194.0 0.467 348.0, 1001.0 -0.05
CBA/J m 822.0 1050.0   7 397.0 1.28 0.1
CE/J m 915.0 495.0   2   350.0 0.541 565.0, 1265.0 0.24
CXB11/HiAJ m 1674.0 723.0   4 361.0 0.432 590.0, 2058.0 1.37
CXB1/ByJ m 358.0 805.0   6 329.0 2.25 -0.59
CXB8/HiAJ m 573.0 511.0   2   361.0 0.891 212.0, 934.0 -0.27
CXB9/HiAJ m 1388.0 903.0   2   638.0 0.65 750.0, 2027.0 0.94
DBA/1J m 0.0 0.0   2   0.0 0.0 -1.12
DBA/2J m 1181.0 828.0   5 370.0 0.701 0.64
DDY/JclSidSeyFrkJ m 1144.0 1504.0   2   1064.0 1.31 81.0, 2208.0 0.58
FVB/NJ m 1635.0 940.0   6 384.0 0.575 1.31
I/LnJ m 1696.0 962.0   5 430.0 0.567 1.4
ILS/IbgTejJ m 1769.0 300.0   4 150.0 0.17 1503.0, 2043.0 1.51
KK/HlJ m 294.0 199.0   2   141.0 0.678 153.0, 435.0 -0.68
LG/J m 230.0 237.0   4 118.0 1.03 16.0, 465.0 -0.78
LP/J m 171.0 285.0   3 165.0 1.67 -0.86
MA/MyJ m 238.0 413.0   3 238.0 1.73 -0.76
MOLF/EiJ m 0.0 0.0   2   0.0 0.0 -1.12
MRL/MpJ m 2084.0 94.8   2   67.0 0.0455 2017.0, 2151.0 1.98
NOD/ShiLtJ m 2020.0 13.6   5 6.09 0.00674 2012.0, 2044.0 1.88
NON/ShiLtJ m 2016.0 12.7   2   9.0 0.00631 2007.0, 2025.0 1.88
NOR/LtJ m 1168.0 542.0   2   383.0 0.465 784.0, 1551.0 0.62
NZB/BlNJ m 1169.0 1195.0   2   845.0 1.02 324.0, 2014.0 0.62
NZW/LacJ m 852.0 734.0   2   519.0 0.861 333.0, 1371.0 0.15
P/J m 120.0 5.66   2   4.0 0.0471 116.0, 124.0 -0.94
PL/J m 178.0 252.0   2   178.0 1.41 -0.85
PWD/PhJ m 486.0 0.0   1   0.0 0.0 486.0, 486.0 -0.4
RIIIS/J m 521.0 457.0   5 204.0 0.876 113.0, 1218.0 -0.34
SEA/GnJ m 1716.0 418.0   2   296.0 0.244 1420.0, 2011.0 1.43
SJL/J m 981.0 961.0   5 430.0 0.98 0.34
SM/J m 1615.0 375.0   3 216.0 0.232 1367.0, 2046.0 1.28
SWR/J m 0.0 0.0   2   0.0 0.0 -1.12
ZALENDE/EiJ m 0.0 0.0   1   0.0 0.0 -1.12


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.0 452.199 890.982 -890.982
129X1/SvJ m 0.0 285.9957 563.5065 -563.5065
A/J m 934.0 285.9957 1497.5065 370.4935
AKR/J m 64.0 452.199 954.982 -826.982
AXB15/PgnJ m 0.0 452.199 890.982 -890.982
AXB19a/PgnJ m 0.0 452.199 890.982 -890.982
AXB1/PgnJ m 204.3333 369.2189 931.8171 -523.1504
AXB23/PgnJ m 0.0 452.199 890.982 -890.982
AXB8/PgnJ m 198.0 369.2189 925.4838 -529.4838
BALB/cByJ m 2007.0 261.0772 2521.4087 1492.5913
BALB/cJ m 1893.0 241.7105 2369.2499 1416.7501
BPL/1J m 574.8 285.9957 1138.3065 11.2935
BTBR T+ Itpr3tf/J m 489.25 319.753 1119.2694 -140.7694
BUB/BnJ m 804.0 452.199 1694.982 -86.982
BXA13/PgnJ m 2279.0 452.199 3169.982 1388.018
BXA14/PgnJ m 238.6 285.9957 802.1065 -324.9065
BXA16/PgnJ m 0.0 319.753 630.0194 -630.0194
BXA25/PgnJ m 0.0 319.753 630.0194 -630.0194
BXA7/PgnJ m 2031.6667 369.2189 2759.1504 1304.1829
BXD100/RwwJ m 266.6667 369.2189 994.1504 -460.8171
BXD1/TyJ m 537.0 369.2189 1264.4838 -190.4838
BXD24/TyJ m 144.25 319.753 774.2694 -485.7694
BXD29/Ty m 87.0 319.753 717.0194 -543.0194
BXD31/TyJ m 705.5 261.0772 1219.9087 191.0913
BXD32/TyJ m 777.5 452.199 1668.482 -113.482
BXD39/TyJ m 0.0 285.9957 563.5065 -563.5065
BXD40/TyJ m 952.5 319.753 1582.5194 322.4806
BXD42/TyJ m 890.7273 192.8183 1270.6433 510.8113
BXD48a/RwwJ m 1951.0 452.199 2841.982 1060.018
BXD48/RwwJ m 584.4 285.9957 1147.9065 20.8935
BXD51/RwwJ m 1681.0 369.2189 2408.4838 953.5162
BXD60/RwwJ m 673.4286 241.7105 1149.6785 197.1787
BXD62/RwwJ m 1072.3333 369.2189 1799.8171 344.8496
BXD65/RwwJ m 270.0 261.0772 784.4087 -244.4087
BXD66/RwwJ m 265.0 369.2189 992.4838 -462.4838
BXD68/RwwJ m 410.6 285.9957 974.1065 -152.9065
BXD75/RwwJ m 549.5 261.0772 1063.9087 35.0913
BXD77/RwwJ m 161.6667 369.2189 889.1504 -565.8171
BXD84/RwwJ m 524.0 319.753 1154.0194 -106.0194
BXD90/RwwJ m 397.5 452.199 1288.482 -493.482
BXD95/RwwJ m 570.5 452.199 1461.482 -320.482
BXD9/TyJ m 1090.8 285.9957 1654.3065 527.2935
BXH19/TyJ m 89.5 452.199 980.482 -801.482
BXH22/KccJ m 14.0 226.0995 459.491 -431.491
BXH4/TyJ m 0.0 369.2189 727.4838 -727.4838
BXH6/TyJ m 1390.3333 369.2189 2117.8171 662.8496
BXH8/TyJ m 1038.5 452.199 1929.482 147.518
BXH9/TyJ m 842.25 319.753 1472.2694 212.2306
C3HeB/FeJ m 227.5 452.199 1118.482 -663.482
C3H/HeJ m 486.2 285.9957 1049.7065 -77.3065
C57BL/10J m 1726.0 452.199 2616.982 835.018
C57BL/6J m 574.2222 213.1686 994.2352 154.2093
C57BLKS/J m 1313.5 452.199 2204.482 422.518
C57BR/cdJ m 1778.3333 369.2189 2505.8171 1050.8496
C57L/J m 1975.5 452.199 2866.482 1084.518
C58/J m 901.25 319.753 1531.2694 271.2306
CAST/EiJ m 718.6667 369.2189 1446.1504 -8.8171
CBA/J m 822.1429 241.7105 1298.3928 345.8929
CE/J m 915.0 452.199 1805.982 24.018
CXB11/HiAJ m 1673.75 319.753 2303.7694 1043.7306
CXB1/ByJ m 358.1667 261.0772 872.5754 -156.242
CXB8/HiAJ m 573.0 452.199 1463.982 -317.982
CXB9/HiAJ m 1388.5 452.199 2279.482 497.518
DBA/1J m 0.0 452.199 890.982 -890.982
DBA/2J m 1181.2 285.9957 1744.7065 617.6935
DDY/JclSidSeyFrkJ m 1144.5 452.199 2035.482 253.518
FVB/NJ m 1634.8333 261.0772 2149.242 1120.4246
I/LnJ m 1695.6 285.9957 2259.1065 1132.0935
ILS/IbgTejJ m 1768.75 319.753 2398.7694 1138.7306
KK/HlJ m 294.0 452.199 1184.982 -596.982
LG/J m 230.5 319.753 860.5194 -399.5194
LP/J m 170.6667 369.2189 898.1504 -556.8171
MA/MyJ m 238.3333 369.2189 965.8171 -489.1504
MOLF/EiJ m 0.0 452.199 890.982 -890.982
MRL/MpJ m 2084.0 452.199 2974.982 1193.018
NOD/ShiLtJ m 2019.8 285.9957 2583.3065 1456.2935
NON/ShiLtJ m 2016.0 452.199 2906.982 1125.018
NOR/LtJ m 1167.5 452.199 2058.482 276.518
NZB/BlNJ m 1169.0 452.199 2059.982 278.018
NZW/LacJ m 852.0 452.199 1742.982 -38.982
P/J m 120.0 452.199 1010.982 -770.982
PL/J m 178.0 452.199 1068.982 -712.982
RIIIS/J m 521.2 285.9957 1084.7065 -42.3065
SEA/GnJ m 1715.5 452.199 2606.482 824.518
SJL/J m 980.6 285.9957 1544.1065 417.0935
SM/J m 1615.0 369.2189 2342.4838 887.5162
SWR/J m 0.0 452.199 890.982 -890.982




  GWAS USING LINEAR MIXED MODELS