Project measure / variable:   CSNA01   VR2active

ID, description, units MPD:60214   VR2active   variable ratio 2 (VR2), active lever presses, 8 h test   [n]  across 3 days  
sucrose study
Data set, strains CSNA01   HMDP   91 strains     sex: m     age: 7-22wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA01 - variable ratio 2 (VR2), active lever presses, 8 h test across 3 days



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested91 strains
Mean of the strain means188   n
Median of the strain means216   n
SD of the strain means± 117
Coefficient of variation (CV)0.622
Min–max range of strain means0   –   424   n
Mean sample size per strain3.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 86 3740107.9089 43489.6268 3.3587 < 0.0001
Residuals 230 2978157.9523 12948.5128


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 0.0 0.0   2   0.0 0.0 -1.61
129X1/SvJ m 0.0 0.0   5 0.0 0.0 -1.61
A/J m 266.0 55.6   5 24.9 0.209 205.0, 309.0 0.66
AKR/J m 216.0 124.0   2   88.0 0.576 128.0, 304.0 0.24
AXB15/PgnJ m 0.0 0.0   2   0.0 0.0 -1.61
AXB19a/PgnJ m 0.0 0.0   2   0.0 0.0 -1.61
AXB1/PgnJ m 234.0 63.1   3 36.4 0.269 187.0, 306.0 0.39
AXB23/PgnJ m 0.0 0.0   2   0.0 0.0 -1.61
AXB6/PgnJ m 311.0 0.0   1   0.0 0.0 311.0, 311.0 1.05
AXB8/PgnJ m 109.0 189.0   3 109.0 1.73 -0.68
BALB/cByJ m 296.0 46.9   6 19.2 0.158 202.0, 327.0 0.92
BALB/cJ m 271.0 84.3   7 31.9 0.311 100.0, 344.0 0.71
BPL/1J m 256.0 143.0   5 64.1 0.559 0.58
BTBR T+ Itpr3tf/J m 79.8 160.0   4 79.8 2.0 -0.93
BUB/BnJ m 317.0 2.83   2   2.0 0.00892 315.0, 319.0 1.1
BXA13/PgnJ m 424.0 38.9   2   27.5 0.0916 397.0, 452.0 2.01
BXA14/PgnJ m 105.0 124.0   5 55.6 1.18 -0.71
BXA16/PgnJ m 16.0 32.0   4 16.0 2.0 -1.47
BXA25/PgnJ m 0.0 0.0   4 0.0 0.0 -1.61
BXA4/PgnJ m 0.0 0.0   1   0.0 0.0 -1.61
BXA7/PgnJ m 320.0 8.62   3 4.98 0.027 312.0, 329.0 1.12
BXD100/RwwJ m 206.0 178.0   3 103.0 0.866 0.15
BXD1/TyJ m 107.0 185.0   3 107.0 1.73 -0.69
BXD24/TyJ m 246.0 94.4   4 47.2 0.383 111.0, 315.0 0.49
BXD29/Ty m 31.2 47.3   4 23.7 1.51 -1.34
BXD31/TyJ m 128.0 164.0   6 66.8 1.28 -0.52
BXD32/TyJ m 152.0 215.0   2   152.0 1.41 -0.31
BXD39/TyJ m 0.0 0.0   5 0.0 0.0 -1.61
BXD40/TyJ m 251.0 168.0   4 84.0 0.669 0.53
BXD42/TyJ m 222.0 140.0   11 42.1 0.631 0.29
BXD48a/RwwJ m 308.0 6.36   2   4.5 0.0206 304.0, 313.0 1.02
BXD48/RwwJ m 123.0 169.0   5 75.6 1.37 -0.56
BXD51/RwwJ m 305.0 17.0   3 9.82 0.0557 288.0, 322.0 1.0
BXD60/RwwJ m 197.0 154.0   7 58.4 0.786 0.07
BXD62/RwwJ m 239.0 120.0   3 69.5 0.504 100.0, 309.0 0.43
BXD65/RwwJ m 182.0 165.0   6 67.2 0.906 -0.05
BXD66/RwwJ m 67.3 117.0   3 67.3 1.73 -1.03
BXD68/RwwJ m 63.6 142.0   5 63.6 2.24 -1.06
BXD75/RwwJ m 267.0 132.0   6 53.8 0.493 0.67
BXD77/RwwJ m 104.0 180.0   3 104.0 1.73 -0.72
BXD84/RwwJ m 98.2 171.0   4 85.4 1.74 -0.77
BXD90/RwwJ m 116.0 164.0   2   116.0 1.41 -0.62
BXD95/RwwJ m 104.0 148.0   2   104.0 1.41 -0.72
BXD9/TyJ m 336.0 27.9   5 12.5 0.083 309.0, 382.0 1.26
BXH19/TyJ m 158.0 223.0   2   158.0 1.41 -0.26
BXH22/KccJ m 32.4 91.6   8 32.4 2.83 -1.33
BXH4/TyJ m 0.0 0.0   3 0.0 0.0 -1.61
BXH6/TyJ m 257.0 135.0   3 77.9 0.525 102.0, 348.0 0.59
BXH8/TyJ m 105.0 148.0   2   105.0 1.41 -0.71
BXH9/TyJ m 307.0 5.06   4 2.53 0.0165 301.0, 313.0 1.01
C3HeB/FeJ m 103.0 146.0   2   103.0 1.41 -0.73
C3H/HeJ m 103.0 128.0   5 57.3 1.24 -0.73
C57BL/10J m 324.0 28.3   2   20.0 0.0873 304.0, 344.0 1.16
C57BL/6J m 104.0 128.0   9 42.7 1.23 -0.72
C57BLKS/J m 312.0 9.19   2   6.5 0.0295 305.0, 318.0 1.05
C57BR/cdJ m 286.0 64.6   3 37.3 0.226 213.0, 335.0 0.83
C57L/J m 316.0 3.54   2   2.5 0.0112 313.0, 318.0 1.09
C58/J m 276.0 117.0   4 58.3 0.423 101.0, 338.0 0.75
CAST/EiJ m 298.0 9.07   3 5.24 0.0304 288.0, 305.0 0.94
CBA/J m 120.0 144.0   7 54.5 1.2 -0.58
CE/J m 315.0 8.49   2   6.0 0.0269 309.0, 321.0 1.08
CXB11/HiAJ m 317.0 3.83   4 1.91 0.0121 314.0, 322.0 1.1
CXB1/ByJ m 82.7 133.0   6 54.5 1.61 -0.9
CXB8/HiAJ m 319.0 9.9   2   7.0 0.031 312.0, 326.0 1.11
CXB9/HiAJ m 330.0 12.7   2   9.0 0.0386 321.0, 339.0 1.21
DBA/1J m 0.0 0.0   2   0.0 0.0 -1.61
DBA/2J m 193.0 134.0   5 60.0 0.696 0.04
DDY/JclSidSeyFrkJ m 218.0 167.0   2   118.0 0.765 100.0, 336.0 0.25
FVB/NJ m 194.0 149.0   6 60.7 0.766 0.05
I/LnJ m 245.0 137.0   5 61.2 0.56 0.48
ILS/IbgTejJ m 315.0 9.84   4 4.92 0.0312 307.0, 328.0 1.08
KK/HlJ m 304.0 1.41   2   1.0 0.00465 303.0, 305.0 0.99
LG/J m 311.0 10.5   4 5.25 0.0337 300.0, 324.0 1.05
LP/J m 138.0 156.0   3 90.3 1.13 -0.43
MA/MyJ m 102.0 176.0   3 102.0 1.73 -0.74
MOLF/EiJ m 15.5 21.9   2   15.5 1.41 -1.48
MRL/MpJ m 331.0 39.6   2   28.0 0.12 303.0, 359.0 1.22
NOD/ShiLtJ m 329.0 18.8   5 8.39 0.057 307.0, 350.0 1.2
NON/ShiLtJ m 304.0 2.12   2   1.5 0.00699 302.0, 305.0 0.99
NOR/LtJ m 318.0 13.4   2   9.5 0.0422 309.0, 328.0 1.11
NZB/BlNJ m 254.0 72.8   2   51.5 0.287 202.0, 305.0 0.56
NZW/LacJ m 306.0 0.707   2   0.5 0.00231 305.0, 306.0 1.0
P/J m 255.0 69.3   2   49.0 0.272 206.0, 304.0 0.57
PL/J m 151.0 214.0   2   151.0 1.41 -0.32
PWD/PhJ m 308.0 0.0   1   0.0 0.0 308.0, 308.0 1.02
RIIIS/J m 300.0 9.21   5 4.12 0.0307 284.0, 308.0 0.95
SEA/GnJ m 273.0 50.9   2   36.0 0.186 237.0, 309.0 0.72
SJL/J m 122.0 84.9   5 38.0 0.696 -0.57
SM/J m 278.0 59.2   3 34.2 0.213 210.0, 314.0 0.76
SWR/J m 0.0 0.0   2   0.0 0.0 -1.61
ZALENDE/EiJ m 39.0 0.0   1   0.0 0.0 39.0, 39.0 -1.27


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.0 80.4628 158.5383 -158.5383
129X1/SvJ m 0.0 50.8891 100.2685 -100.2685
A/J m 266.4 50.8891 366.6685 166.1315
AKR/J m 216.0 80.4628 374.5383 57.4617
AXB15/PgnJ m 0.0 80.4628 158.5383 -158.5383
AXB19a/PgnJ m 0.0 80.4628 158.5383 -158.5383
AXB1/PgnJ m 234.3333 65.6976 363.7793 104.8873
AXB23/PgnJ m 0.0 80.4628 158.5383 -158.5383
AXB8/PgnJ m 109.3333 65.6976 238.7793 -20.1127
BALB/cByJ m 296.1667 46.4552 387.6988 204.6345
BALB/cJ m 271.1429 43.0092 355.8852 186.4005
BPL/1J m 256.4 50.8891 356.6685 156.1315
BTBR T+ Itpr3tf/J m 79.75 56.8958 191.8535 -32.3535
BUB/BnJ m 317.0 80.4628 475.5383 158.4617
BXA13/PgnJ m 424.5 80.4628 583.0383 265.9617
BXA14/PgnJ m 105.4 50.8891 205.6685 5.1315
BXA16/PgnJ m 16.0 56.8958 128.1035 -96.1035
BXA25/PgnJ m 0.0 56.8958 112.1035 -112.1035
BXA7/PgnJ m 319.6667 65.6976 449.1127 190.2207
BXD100/RwwJ m 205.6667 65.6976 335.1127 76.2207
BXD1/TyJ m 106.6667 65.6976 236.1127 -22.7793
BXD24/TyJ m 246.25 56.8958 358.3535 134.1465
BXD29/Ty m 31.25 56.8958 143.3535 -80.8535
BXD31/TyJ m 128.3333 46.4552 219.8655 36.8012
BXD32/TyJ m 152.0 80.4628 310.5383 -6.5383
BXD39/TyJ m 0.0 50.8891 100.2685 -100.2685
BXD40/TyJ m 251.0 56.8958 363.1035 138.8965
BXD42/TyJ m 221.5455 34.3094 289.1464 153.9445
BXD48a/RwwJ m 308.5 80.4628 467.0383 149.9617
BXD48/RwwJ m 123.4 50.8891 223.6685 23.1315
BXD51/RwwJ m 305.3333 65.6976 434.7793 175.8873
BXD60/RwwJ m 196.5714 43.0092 281.3137 111.8291
BXD62/RwwJ m 239.0 65.6976 368.446 109.554
BXD65/RwwJ m 181.6667 46.4552 273.1988 90.1345
BXD66/RwwJ m 67.3333 65.6976 196.7793 -62.1127
BXD68/RwwJ m 63.6 50.8891 163.8685 -36.6685
BXD75/RwwJ m 267.3333 46.4552 358.8655 175.8012
BXD77/RwwJ m 104.0 65.6976 233.446 -25.446
BXD84/RwwJ m 98.25 56.8958 210.3535 -13.8535
BXD90/RwwJ m 116.0 80.4628 274.5383 -42.5383
BXD95/RwwJ m 104.5 80.4628 263.0383 -54.0383
BXD9/TyJ m 335.8 50.8891 436.0685 235.5315
BXH19/TyJ m 157.5 80.4628 316.0383 -1.0383
BXH22/KccJ m 32.375 40.2314 111.6442 -46.8942
BXH4/TyJ m 0.0 65.6976 129.446 -129.446
BXH6/TyJ m 257.0 65.6976 386.446 127.554
BXH8/TyJ m 105.0 80.4628 263.5383 -53.5383
BXH9/TyJ m 306.75 56.8958 418.8535 194.6465
C3HeB/FeJ m 103.0 80.4628 261.5383 -55.5383
C3H/HeJ m 103.2 50.8891 203.4685 2.9315
C57BL/10J m 324.0 80.4628 482.5383 165.4617
C57BL/6J m 104.3333 37.9305 179.069 29.5976
C57BLKS/J m 311.5 80.4628 470.0383 152.9617
C57BR/cdJ m 286.3333 65.6976 415.7793 156.8873
C57L/J m 315.5 80.4628 474.0383 156.9617
C58/J m 276.0 56.8958 388.1035 163.8965
CAST/EiJ m 298.3333 65.6976 427.7793 168.8873
CBA/J m 120.2857 43.0092 205.028 35.5434
CE/J m 315.0 80.4628 473.5383 156.4617
CXB11/HiAJ m 317.0 56.8958 429.1035 204.8965
CXB1/ByJ m 82.6667 46.4552 174.1988 -8.8655
CXB8/HiAJ m 319.0 80.4628 477.5383 160.4617
CXB9/HiAJ m 330.0 80.4628 488.5383 171.4617
DBA/1J m 0.0 80.4628 158.5383 -158.5383
DBA/2J m 192.8 50.8891 293.0685 92.5315
DDY/JclSidSeyFrkJ m 218.0 80.4628 376.5383 59.4617
FVB/NJ m 194.1667 46.4552 285.6988 102.6345
I/LnJ m 244.6 50.8891 344.8685 144.3315
ILS/IbgTejJ m 315.25 56.8958 427.3535 203.1465
KK/HlJ m 304.0 80.4628 462.5383 145.4617
LG/J m 311.25 56.8958 423.3535 199.1465
LP/J m 138.3333 65.6976 267.7793 8.8873
MA/MyJ m 101.6667 65.6976 231.1127 -27.7793
MOLF/EiJ m 15.5 80.4628 174.0383 -143.0383
MRL/MpJ m 331.0 80.4628 489.5383 172.4617
NOD/ShiLtJ m 329.2 50.8891 429.4685 228.9315
NON/ShiLtJ m 303.5 80.4628 462.0383 144.9617
NOR/LtJ m 318.5 80.4628 477.0383 159.9617
NZB/BlNJ m 253.5 80.4628 412.0383 94.9617
NZW/LacJ m 305.5 80.4628 464.0383 146.9617
P/J m 255.0 80.4628 413.5383 96.4617
PL/J m 151.0 80.4628 309.5383 -7.5383
RIIIS/J m 299.6 50.8891 399.8685 199.3315
SEA/GnJ m 273.0 80.4628 431.5383 114.4617
SJL/J m 122.0 50.8891 222.2685 21.7315
SM/J m 278.3333 65.6976 407.7793 148.8873
SWR/J m 0.0 80.4628 158.5383 -158.5383




  GWAS USING LINEAR MIXED MODELS