Project measure / variable:   CSNA01   VR2activeD3

ID, description, units MPD:60213   VR2activeD3   variable ratio 2 (VR2), active lever presses, 8 h test   [n]  day 3  
sucrose study
Data set, strains CSNA01   HMDP   91 strains     sex: m     age: 7-22wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA01 - variable ratio 2 (VR2), active lever presses, 8 h test day 3



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested91 strains
Mean of the strain means70.5   n
Median of the strain means87.0   n
SD of the strain means± 39.8
Coefficient of variation (CV)0.565
Min–max range of strain means0   –   138   n
Mean sample size per strain3.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 86 426272.3584 4956.6553 2.9872 < 0.0001
Residuals 230 381634.9602 1659.2824


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 0.0 0.0   2   0.0 0.0 -1.77
129X1/SvJ m 0.0 0.0   5 0.0 0.0 -1.77
A/J m 102.0 0.837   5 0.374 0.00819 101.0, 103.0 0.79
AKR/J m 101.0 0.0   2   0.0 0.0 101.0, 101.0 0.77
AXB15/PgnJ m 0.0 0.0   2   0.0 0.0 -1.77
AXB19a/PgnJ m 0.0 0.0   2   0.0 0.0 -1.77
AXB1/PgnJ m 97.0 8.89   3 5.13 0.0916 87.0, 104.0 0.67
AXB23/PgnJ m 0.0 0.0   2   0.0 0.0 -1.77
AXB6/PgnJ m 100.0 0.0   1   0.0 0.0 100.0, 100.0 0.74
AXB8/PgnJ m 34.0 58.9   3 34.0 1.73 -0.92
BALB/cByJ m 105.0 4.47   6 1.83 0.0426 100.0, 112.0 0.87
BALB/cJ m 104.0 6.07   7 2.3 0.0583 100.0, 117.0 0.84
BPL/1J m 87.0 48.7   5 21.8 0.559 0.41
BTBR T+ Itpr3tf/J m 26.8 53.5   4 26.8 2.0 -1.1
BUB/BnJ m 104.0 2.12   2   1.5 0.0205 102.0, 105.0 0.84
BXA13/PgnJ m 138.0 33.2   2   23.5 0.24 115.0, 162.0 1.69
BXA14/PgnJ m 65.0 59.6   5 26.6 0.917 -0.14
BXA16/PgnJ m 16.0 32.0   4 16.0 2.0 -1.37
BXA25/PgnJ m 0.0 0.0   4 0.0 0.0 -1.77
BXA4/PgnJ m 0.0 0.0   1   0.0 0.0 -1.77
BXA7/PgnJ m 104.0 0.577   3 0.333 0.00553 104.0, 105.0 0.84
BXD100/RwwJ m 68.0 58.9   3 34.0 0.866 -0.06
BXD1/TyJ m 36.3 62.9   3 36.3 1.73 -0.86
BXD24/TyJ m 105.0 5.19   4 2.59 0.0495 100.0, 111.0 0.87
BXD29/Ty m 31.2 47.3   4 23.7 1.51 -0.99
BXD31/TyJ m 56.8 62.6   6 25.6 1.1 -0.34
BXD32/TyJ m 51.0 72.1   2   51.0 1.41 -0.49
BXD39/TyJ m 0.0 0.0   5 0.0 0.0 -1.77
BXD40/TyJ m 86.5 58.7   4 29.4 0.679 0.4
BXD42/TyJ m 85.8 42.6   11 12.8 0.496 0.38
BXD48a/RwwJ m 102.0 3.54   2   2.5 0.0345 100.0, 105.0 0.79
BXD48/RwwJ m 41.6 57.0   5 25.5 1.37 -0.73
BXD51/RwwJ m 106.0 6.43   3 3.71 0.0608 101.0, 113.0 0.89
BXD60/RwwJ m 76.3 52.3   7 19.8 0.685 0.15
BXD62/RwwJ m 100.0 0.577   3 0.333 0.00575 100.0, 101.0 0.74
BXD65/RwwJ m 71.3 55.4   6 22.6 0.777 0.02
BXD66/RwwJ m 33.7 58.3   3 33.7 1.73 -0.92
BXD68/RwwJ m 21.6 48.3   5 21.6 2.24 -1.23
BXD75/RwwJ m 89.0 44.2   6 18.0 0.497 0.46
BXD77/RwwJ m 35.3 61.2   3 35.3 1.73 -0.88
BXD84/RwwJ m 39.8 56.1   4 28.0 1.41 -0.77
BXD90/RwwJ m 54.5 77.1   2   54.5 1.41 -0.4
BXD95/RwwJ m 53.5 75.7   2   53.5 1.41 -0.43
BXD9/TyJ m 111.0 9.88   5 4.42 0.0892 103.0, 128.0 1.02
BXH19/TyJ m 51.5 72.8   2   51.5 1.41 -0.48
BXH22/KccJ m 13.0 36.8   8 13.0 2.83 -1.44
BXH4/TyJ m 0.0 0.0   3 0.0 0.0 -1.77
BXH6/TyJ m 109.0 9.45   3 5.46 0.0864 102.0, 120.0 0.97
BXH8/TyJ m 53.5 75.7   2   53.5 1.41 -0.43
BXH9/TyJ m 104.0 3.11   4 1.55 0.03 101.0, 108.0 0.84
C3HeB/FeJ m 52.5 74.2   2   52.5 1.41 -0.45
C3H/HeJ m 62.2 56.9   5 25.4 0.914 -0.21
C57BL/10J m 109.0 8.49   2   6.0 0.0778 103.0, 115.0 0.97
C57BL/6J m 57.7 54.7   9 18.2 0.949 -0.32
C57BLKS/J m 106.0 4.95   2   3.5 0.0465 103.0, 110.0 0.89
C57BR/cdJ m 107.0 2.65   3 1.53 0.0247 104.0, 109.0 0.92
C57L/J m 107.0 1.41   2   1.0 0.0132 106.0, 108.0 0.92
C58/J m 108.0 5.25   4 2.63 0.0485 101.0, 113.0 0.94
CAST/EiJ m 101.0 0.0   3 0.0 0.0 101.0, 101.0 0.77
CBA/J m 61.0 57.4   7 21.7 0.94 -0.24
CE/J m 103.0 1.41   2   1.0 0.0137 102.0, 104.0 0.82
CXB11/HiAJ m 107.0 4.08   4 2.04 0.0382 104.0, 113.0 0.92
CXB1/ByJ m 33.8 52.4   6 21.4 1.55 -0.92
CXB8/HiAJ m 110.0 7.78   2   5.5 0.0704 105.0, 116.0 0.99
CXB9/HiAJ m 106.0 0.707   2   0.5 0.0067 105.0, 106.0 0.89
DBA/1J m 0.0 0.0   2   0.0 0.0 -1.77
DBA/2J m 89.2 50.2   5 22.4 0.563 0.47
DDY/JclSidSeyFrkJ m 112.0 17.7   2   12.5 0.157 100.0, 125.0 1.04
FVB/NJ m 103.0 54.3   6 22.2 0.528 0.82
I/LnJ m 90.4 53.8   5 24.1 0.595 0.5
ILS/IbgTejJ m 108.0 4.57   4 2.29 0.0424 103.0, 113.0 0.94
KK/HlJ m 102.0 0.0   2   0.0 0.0 102.0, 102.0 0.79
LG/J m 104.0 5.48   4 2.74 0.0527 100.0, 112.0 0.84
LP/J m 69.3 60.1   3 34.7 0.867 -0.03
MA/MyJ m 34.0 58.9   3 34.0 1.73 -0.92
MOLF/EiJ m 15.5 21.9   2   15.5 1.41 -1.38
MRL/MpJ m 122.0 29.0   2   20.5 0.239 101.0, 142.0 1.29
NOD/ShiLtJ m 104.0 1.79   5 0.8 0.0172 101.0, 106.0 0.84
NON/ShiLtJ m 101.0 0.0   2   0.0 0.0 101.0, 101.0 0.77
NOR/LtJ m 102.0 1.41   2   1.0 0.0139 101.0, 103.0 0.79
NZB/BlNJ m 101.0 0.0   2   0.0 0.0 101.0, 101.0 0.77
NZW/LacJ m 104.0 2.12   2   1.5 0.0205 102.0, 105.0 0.84
P/J m 102.0 2.83   2   2.0 0.0277 100.0, 104.0 0.79
PL/J m 51.0 72.1   2   51.0 1.41 -0.49
PWD/PhJ m 100.0 0.0   1   0.0 0.0 100.0, 100.0 0.74
RIIIS/J m 101.0 2.07   5 0.927 0.0205 100.0, 105.0 0.77
SEA/GnJ m 110.0 12.0   2   8.5 0.11 101.0, 118.0 0.99
SJL/J m 82.0 45.9   5 20.5 0.559 0.29
SM/J m 105.0 3.61   3 2.08 0.0343 102.0, 109.0 0.87
SWR/J m 0.0 0.0   2   0.0 0.0 -1.77
ZALENDE/EiJ m 0.0 0.0   1   0.0 0.0 -1.77


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.0 28.8035 56.7524 -56.7524
129X1/SvJ m 0.0 18.2169 35.8934 -35.8934
A/J m 102.2 18.2169 138.0934 66.3066
AKR/J m 101.0 28.8035 157.7524 44.2476
AXB15/PgnJ m 0.0 28.8035 56.7524 -56.7524
AXB19a/PgnJ m 0.0 28.8035 56.7524 -56.7524
AXB1/PgnJ m 97.0 23.518 143.3382 50.6618
AXB23/PgnJ m 0.0 28.8035 56.7524 -56.7524
AXB8/PgnJ m 34.0 23.518 80.3382 -12.3382
BALB/cByJ m 105.0 16.6297 137.766 72.234
BALB/cJ m 104.2857 15.3961 134.6212 73.9503
BPL/1J m 87.0 18.2169 122.8934 51.1066
BTBR T+ Itpr3tf/J m 26.75 20.3671 66.88 -13.38
BUB/BnJ m 103.5 28.8035 160.2524 46.7476
BXA13/PgnJ m 138.5 28.8035 195.2524 81.7476
BXA14/PgnJ m 65.0 18.2169 100.8934 29.1066
BXA16/PgnJ m 16.0 20.3671 56.13 -24.13
BXA25/PgnJ m 0.0 20.3671 40.13 -40.13
BXA7/PgnJ m 104.3333 23.518 150.6715 57.9952
BXD100/RwwJ m 68.0 23.518 114.3382 21.6618
BXD1/TyJ m 36.3333 23.518 82.6715 -10.0048
BXD24/TyJ m 104.75 20.3671 144.88 64.62
BXD29/Ty m 31.25 20.3671 71.38 -8.88
BXD31/TyJ m 56.8333 16.6297 89.5994 24.0673
BXD32/TyJ m 51.0 28.8035 107.7524 -5.7524
BXD39/TyJ m 0.0 18.2169 35.8934 -35.8934
BXD40/TyJ m 86.5 20.3671 126.63 46.37
BXD42/TyJ m 85.8182 12.2819 110.0175 61.6189
BXD48a/RwwJ m 102.5 28.8035 159.2524 45.7476
BXD48/RwwJ m 41.6 18.2169 77.4934 5.7066
BXD51/RwwJ m 105.6667 23.518 152.0048 59.3285
BXD60/RwwJ m 76.2857 15.3961 106.6212 45.9503
BXD62/RwwJ m 100.3333 23.518 146.6715 53.9952
BXD65/RwwJ m 71.3333 16.6297 104.0994 38.5673
BXD66/RwwJ m 33.6667 23.518 80.0048 -12.6715
BXD68/RwwJ m 21.6 18.2169 57.4934 -14.2934
BXD75/RwwJ m 89.0 16.6297 121.766 56.234
BXD77/RwwJ m 35.3333 23.518 81.6715 -11.0048
BXD84/RwwJ m 39.75 20.3671 79.88 -0.38
BXD90/RwwJ m 54.5 28.8035 111.2524 -2.2524
BXD95/RwwJ m 53.5 28.8035 110.2524 -3.2524
BXD9/TyJ m 110.8 18.2169 146.6934 74.9066
BXH19/TyJ m 51.5 28.8035 108.2524 -5.2524
BXH22/KccJ m 13.0 14.4017 41.3762 -15.3762
BXH4/TyJ m 0.0 23.518 46.3382 -46.3382
BXH6/TyJ m 109.3333 23.518 155.6715 62.9952
BXH8/TyJ m 53.5 28.8035 110.2524 -3.2524
BXH9/TyJ m 103.5 20.3671 143.63 63.37
C3HeB/FeJ m 52.5 28.8035 109.2524 -4.2524
C3H/HeJ m 62.2 18.2169 98.0934 26.3066
C57BL/10J m 109.0 28.8035 165.7524 52.2476
C57BL/6J m 57.6667 13.5781 84.42 30.9133
C57BLKS/J m 106.5 28.8035 163.2524 49.7476
C57BR/cdJ m 107.0 23.518 153.3382 60.6618
C57L/J m 107.0 28.8035 163.7524 50.2476
C58/J m 108.25 20.3671 148.38 68.12
CAST/EiJ m 101.0 23.518 147.3382 54.6618
CBA/J m 61.0 15.3961 91.3355 30.6645
CE/J m 103.0 28.8035 159.7524 46.2476
CXB11/HiAJ m 107.0 20.3671 147.13 66.87
CXB1/ByJ m 33.8333 16.6297 66.5994 1.0673
CXB8/HiAJ m 110.5 28.8035 167.2524 53.7476
CXB9/HiAJ m 105.5 28.8035 162.2524 48.7476
DBA/1J m 0.0 28.8035 56.7524 -56.7524
DBA/2J m 89.2 18.2169 125.0934 53.3066
DDY/JclSidSeyFrkJ m 112.5 28.8035 169.2524 55.7476
FVB/NJ m 102.8333 16.6297 135.5994 70.0673
I/LnJ m 90.4 18.2169 126.2934 54.5066
ILS/IbgTejJ m 107.75 20.3671 147.88 67.62
KK/HlJ m 102.0 28.8035 158.7524 45.2476
LG/J m 104.0 20.3671 144.13 63.87
LP/J m 69.3333 23.518 115.6715 22.9952
MA/MyJ m 34.0 23.518 80.3382 -12.3382
MOLF/EiJ m 15.5 28.8035 72.2524 -41.2524
MRL/MpJ m 121.5 28.8035 178.2524 64.7476
NOD/ShiLtJ m 103.8 18.2169 139.6934 67.9066
NON/ShiLtJ m 101.0 28.8035 157.7524 44.2476
NOR/LtJ m 102.0 28.8035 158.7524 45.2476
NZB/BlNJ m 101.0 28.8035 157.7524 44.2476
NZW/LacJ m 103.5 28.8035 160.2524 46.7476
P/J m 102.0 28.8035 158.7524 45.2476
PL/J m 51.0 28.8035 107.7524 -5.7524
RIIIS/J m 101.4 18.2169 137.2934 65.5066
SEA/GnJ m 109.5 28.8035 166.2524 52.7476
SJL/J m 82.0 18.2169 117.8934 46.1066
SM/J m 105.0 23.518 151.3382 58.6618
SWR/J m 0.0 28.8035 56.7524 -56.7524




  GWAS USING LINEAR MIXED MODELS