Project measure / variable:   CSNA01   VR2activeD1

ID, description, units MPD:60211   VR2activeD1   variable ratio 2 (VR2), active lever presses, 8 h test   [n]  day 1  
sucrose study
Data set, strains CSNA01   HMDP   91 strains     sex: m     age: 7-22wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA01 - variable ratio 2 (VR2), active lever presses, 8 h test day 1



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested91 strains
Mean of the strain means55.0   n
Median of the strain means52.5   n
SD of the strain means± 40.6
Coefficient of variation (CV)0.738
Min–max range of strain means0   –   132   n
Mean sample size per strain3.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 86 447996.9967 5209.2674 2.7695 < 0.0001
Residuals 230 432612.1642 1880.9225


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 0.0 0.0   2   0.0 0.0 -1.36
129X1/SvJ m 0.0 0.0   5 0.0 0.0 -1.36
A/J m 61.0 55.7   5 24.9 0.913 0.15
AKR/J m 50.0 70.7   2   50.0 1.41 -0.12
AXB15/PgnJ m 0.0 0.0   2   0.0 0.0 -1.36
AXB19a/PgnJ m 0.0 0.0   2   0.0 0.0 -1.36
AXB1/PgnJ m 35.3 61.2   3 35.3 1.73 -0.49
AXB23/PgnJ m 0.0 0.0   2   0.0 0.0 -1.36
AXB6/PgnJ m 102.0 0.0   1   0.0 0.0 102.0, 102.0 1.16
AXB8/PgnJ m 38.0 65.8   3 38.0 1.73 -0.42
BALB/cByJ m 88.2 43.6   6 17.8 0.495 0.82
BALB/cJ m 74.9 51.2   7 19.3 0.684 0.49
BPL/1J m 83.4 46.7   5 20.9 0.56 0.7
BTBR T+ Itpr3tf/J m 25.5 51.0   4 25.5 2.0 -0.73
BUB/BnJ m 105.0 1.41   2   1.0 0.0135 104.0, 106.0 1.23
BXA13/PgnJ m 132.0 7.07   2   5.0 0.0536 127.0, 137.0 1.9
BXA14/PgnJ m 20.4 45.6   5 20.4 2.24 -0.85
BXA16/PgnJ m 0.0 0.0   4 0.0 0.0 -1.36
BXA25/PgnJ m 0.0 0.0   4 0.0 0.0 -1.36
BXA4/PgnJ m 0.0 0.0   1   0.0 0.0 -1.36
BXA7/PgnJ m 110.0 2.52   3 1.45 0.0228 108.0, 113.0 1.36
BXD100/RwwJ m 68.0 58.9   3 34.0 0.866 0.32
BXD1/TyJ m 36.0 62.4   3 36.0 1.73 -0.47
BXD24/TyJ m 64.8 49.5   4 24.8 0.765 0.24
BXD29/Ty m 0.0 0.0   4 0.0 0.0 -1.36
BXD31/TyJ m 34.2 52.9   6 21.6 1.55 -0.51
BXD32/TyJ m 51.0 72.1   2   51.0 1.41 -0.1
BXD39/TyJ m 0.0 0.0   5 0.0 0.0 -1.36
BXD40/TyJ m 81.5 54.3   4 27.2 0.667 0.65
BXD42/TyJ m 67.5 53.6   11 16.2 0.794 0.31
BXD48a/RwwJ m 102.0 2.12   2   1.5 0.0207 101.0, 104.0 1.16
BXD48/RwwJ m 40.2 55.0   5 24.6 1.37 -0.36
BXD51/RwwJ m 97.3 10.7   3 6.17 0.11 85.0, 104.0 1.04
BXD60/RwwJ m 60.4 56.5   7 21.4 0.936 0.13
BXD62/RwwJ m 69.0 59.8   3 34.5 0.866 0.34
BXD65/RwwJ m 53.8 59.1   6 24.1 1.1 -0.03
BXD66/RwwJ m 0.0 0.0   3 0.0 0.0 -1.36
BXD68/RwwJ m 21.2 47.4   5 21.2 2.24 -0.83
BXD75/RwwJ m 88.7 43.6   6 17.8 0.492 0.83
BXD77/RwwJ m 34.7 60.0   3 34.7 1.73 -0.5
BXD84/RwwJ m 30.8 61.5   4 30.8 2.0 -0.6
BXD90/RwwJ m 6.0 8.49   2   6.0 1.41 -1.21
BXD95/RwwJ m 0.0 0.0   2   0.0 0.0 -1.36
BXD9/TyJ m 113.0 9.53   5 4.26 0.084 105.0, 129.0 1.43
BXH19/TyJ m 53.5 75.7   2   53.5 1.41 -0.04
BXH22/KccJ m 6.62 18.7   8 6.62 2.83 -1.19
BXH4/TyJ m 0.0 0.0   3 0.0 0.0 -1.36
BXH6/TyJ m 72.0 62.5   3 36.1 0.868 0.42
BXH8/TyJ m 0.0 0.0   2   0.0 0.0 -1.36
BXH9/TyJ m 101.0 0.957   4 0.479 0.00946 100.0, 102.0 1.13
C3HeB/FeJ m 0.0 0.0   2   0.0 0.0 -1.36
C3H/HeJ m 20.0 44.7   5 20.0 2.24 -0.86
C57BL/10J m 104.0 5.66   2   4.0 0.0544 100.0, 108.0 1.21
C57BL/6J m 23.0 45.7   9 15.2 1.99 -0.79
C57BLKS/J m 102.0 0.707   2   0.5 0.00697 101.0, 102.0 1.16
C57BR/cdJ m 74.0 64.5   3 37.2 0.871 0.47
C57L/J m 107.0 4.24   2   3.0 0.0397 104.0, 110.0 1.28
C58/J m 84.0 56.1   4 28.1 0.668 0.71
CAST/EiJ m 97.7 10.4   3 6.01 0.107 86.0, 106.0 1.05
CBA/J m 29.1 49.8   7 18.8 1.71 -0.64
CE/J m 106.0 4.95   2   3.5 0.0469 102.0, 109.0 1.26
CXB11/HiAJ m 102.0 1.0   4 0.5 0.00976 102.0, 104.0 1.16
CXB1/ByJ m 32.0 49.9   6 20.4 1.56 -0.57
CXB8/HiAJ m 106.0 2.12   2   1.5 0.0201 104.0, 107.0 1.26
CXB9/HiAJ m 118.0 13.4   2   9.5 0.113 109.0, 128.0 1.55
DBA/1J m 0.0 0.0   2   0.0 0.0 -1.36
DBA/2J m 41.4 56.7   5 25.4 1.37 -0.34
DDY/JclSidSeyFrkJ m 52.5 74.2   2   52.5 1.41 -0.06
FVB/NJ m 36.3 56.3   6 23.0 1.55 -0.46
I/LnJ m 62.8 57.3   5 25.6 0.913 0.19
ILS/IbgTejJ m 103.0 2.45   4 1.22 0.0238 100.0, 106.0 1.18
KK/HlJ m 100.0 0.707   2   0.5 0.00704 100.0, 101.0 1.11
LG/J m 104.0 2.87   4 1.44 0.0277 100.0, 107.0 1.21
LP/J m 34.3 59.5   3 34.3 1.73 -0.51
MA/MyJ m 34.0 58.9   3 34.0 1.73 -0.52
MOLF/EiJ m 0.0 0.0   2   0.0 0.0 -1.36
MRL/MpJ m 104.0 3.54   2   2.5 0.0338 102.0, 107.0 1.21
NOD/ShiLtJ m 114.0 13.3   5 5.93 0.116 101.0, 131.0 1.45
NON/ShiLtJ m 101.0 0.0   2   0.0 0.0 101.0, 101.0 1.13
NOR/LtJ m 112.0 12.0   2   8.5 0.107 104.0, 121.0 1.4
NZB/BlNJ m 51.0 72.1   2   51.0 1.41 -0.1
NZW/LacJ m 102.0 0.707   2   0.5 0.00697 101.0, 102.0 1.16
P/J m 52.0 73.5   2   52.0 1.41 -0.07
PL/J m 50.0 70.7   2   50.0 1.41 -0.12
PWD/PhJ m 107.0 0.0   1   0.0 0.0 107.0, 107.0 1.28
RIIIS/J m 97.2 7.4   5 3.31 0.0761 84.0, 101.0 1.04
SEA/GnJ m 56.0 70.7   2   50.0 1.26 6.0, 106.0 0.02
SJL/J m 0.0 0.0   5 0.0 0.0 -1.36
SM/J m 68.3 59.2   3 34.2 0.866 0.33
SWR/J m 0.0 0.0   2   0.0 0.0 -1.36
ZALENDE/EiJ m 39.0 0.0   1   0.0 0.0 39.0, 39.0 -0.39


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.0 30.6669 60.424 -60.424
129X1/SvJ m 0.0 19.3955 38.2155 -38.2155
A/J m 61.0 19.3955 99.2155 22.7845
AKR/J m 50.0 30.6669 110.424 -10.424
AXB15/PgnJ m 0.0 30.6669 60.424 -60.424
AXB19a/PgnJ m 0.0 30.6669 60.424 -60.424
AXB1/PgnJ m 35.3333 25.0395 84.6694 -14.0027
AXB23/PgnJ m 0.0 30.6669 60.424 -60.424
AXB8/PgnJ m 38.0 25.0395 87.336 -11.336
BALB/cByJ m 88.1667 17.7056 123.0525 53.2808
BALB/cJ m 74.8571 16.3922 107.1552 42.5591
BPL/1J m 83.4 19.3955 121.6155 45.1845
BTBR T+ Itpr3tf/J m 25.5 21.6848 68.2263 -17.2263
BUB/BnJ m 105.0 30.6669 165.424 44.576
BXA13/PgnJ m 132.0 30.6669 192.424 71.576
BXA14/PgnJ m 20.4 19.3955 58.6155 -17.8155
BXA16/PgnJ m 0.0 21.6848 42.7263 -42.7263
BXA25/PgnJ m 0.0 21.6848 42.7263 -42.7263
BXA7/PgnJ m 110.3333 25.0395 159.6694 60.9973
BXD100/RwwJ m 68.0 25.0395 117.336 18.664
BXD1/TyJ m 36.0 25.0395 85.336 -13.336
BXD24/TyJ m 64.75 21.6848 107.4763 22.0237
BXD29/Ty m 0.0 21.6848 42.7263 -42.7263
BXD31/TyJ m 34.1667 17.7056 69.0525 -0.7192
BXD32/TyJ m 51.0 30.6669 111.424 -9.424
BXD39/TyJ m 0.0 19.3955 38.2155 -38.2155
BXD40/TyJ m 81.5 21.6848 124.2263 38.7737
BXD42/TyJ m 67.5455 13.0764 93.3104 41.7806
BXD48a/RwwJ m 102.5 30.6669 162.924 42.076
BXD48/RwwJ m 40.2 19.3955 78.4155 1.9845
BXD51/RwwJ m 97.3333 25.0395 146.6694 47.9973
BXD60/RwwJ m 60.4286 16.3922 92.7266 28.1306
BXD62/RwwJ m 69.0 25.0395 118.336 19.664
BXD65/RwwJ m 53.8333 17.7056 88.7192 18.9475
BXD66/RwwJ m 0.0 25.0395 49.336 -49.336
BXD68/RwwJ m 21.2 19.3955 59.4155 -17.0155
BXD75/RwwJ m 88.6667 17.7056 123.5525 53.7808
BXD77/RwwJ m 34.6667 25.0395 84.0027 -14.6694
BXD84/RwwJ m 30.75 21.6848 73.4763 -11.9763
BXD90/RwwJ m 6.0 30.6669 66.424 -54.424
BXD95/RwwJ m 0.0 30.6669 60.424 -60.424
BXD9/TyJ m 113.4 19.3955 151.6155 75.1845
BXH19/TyJ m 53.5 30.6669 113.924 -6.924
BXH22/KccJ m 6.625 15.3335 36.837 -23.587
BXH4/TyJ m 0.0 25.0395 49.336 -49.336
BXH6/TyJ m 72.0 25.0395 121.336 22.664
BXH8/TyJ m 0.0 30.6669 60.424 -60.424
BXH9/TyJ m 101.25 21.6848 143.9763 58.5237
C3HeB/FeJ m 0.0 30.6669 60.424 -60.424
C3H/HeJ m 20.0 19.3955 58.2155 -18.2155
C57BL/10J m 104.0 30.6669 164.424 43.576
C57BL/6J m 23.0 14.4565 51.4842 -5.4842
C57BLKS/J m 101.5 30.6669 161.924 41.076
C57BR/cdJ m 74.0 25.0395 123.336 24.664
C57L/J m 107.0 30.6669 167.424 46.576
C58/J m 84.0 21.6848 126.7263 41.2737
CAST/EiJ m 97.6667 25.0395 147.0027 48.3306
CBA/J m 29.1429 16.3922 61.4409 -3.1552
CE/J m 105.5 30.6669 165.924 45.076
CXB11/HiAJ m 102.5 21.6848 145.2263 59.7737
CXB1/ByJ m 32.0 17.7056 66.8858 -2.8858
CXB8/HiAJ m 105.5 30.6669 165.924 45.076
CXB9/HiAJ m 118.5 30.6669 178.924 58.076
DBA/1J m 0.0 30.6669 60.424 -60.424
DBA/2J m 41.4 19.3955 79.6155 3.1845
DDY/JclSidSeyFrkJ m 52.5 30.6669 112.924 -7.924
FVB/NJ m 36.3333 17.7056 71.2192 1.4475
I/LnJ m 62.8 19.3955 101.0155 24.5845
ILS/IbgTejJ m 103.0 21.6848 145.7263 60.2737
KK/HlJ m 100.5 30.6669 160.924 40.076
LG/J m 103.75 21.6848 146.4763 61.0237
LP/J m 34.3333 25.0395 83.6694 -15.0027
MA/MyJ m 34.0 25.0395 83.336 -15.336
MOLF/EiJ m 0.0 30.6669 60.424 -60.424
MRL/MpJ m 104.5 30.6669 164.924 44.076
NOD/ShiLtJ m 114.2 19.3955 152.4155 75.9845
NON/ShiLtJ m 101.0 30.6669 161.424 40.576
NOR/LtJ m 112.5 30.6669 172.924 52.076
NZB/BlNJ m 51.0 30.6669 111.424 -9.424
NZW/LacJ m 101.5 30.6669 161.924 41.076
P/J m 52.0 30.6669 112.424 -8.424
PL/J m 50.0 30.6669 110.424 -10.424
RIIIS/J m 97.2 19.3955 135.4155 58.9845
SEA/GnJ m 56.0 30.6669 116.424 -4.424
SJL/J m 0.0 19.3955 38.2155 -38.2155
SM/J m 68.3333 25.0395 117.6694 18.9973
SWR/J m 0.0 30.6669 60.424 -60.424




  GWAS USING LINEAR MIXED MODELS