Project measure / variable:   CSNA01   FR1activeD2

ID, description, units MPD:60202   FR1activeD2   fixed ratio 1 (FR1), active lever presses, 8 h test   [n]  day 2  
sucrose study
Data set, strains CSNA01   HMDP   91 strains     sex: m     age: 7-22wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA01 - fixed ratio 1 (FR1), active lever presses, 8 h test day 2



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested91 strains
Mean of the strain means34.1   n
Median of the strain means37.0   n
SD of the strain means± 21.3
Coefficient of variation (CV)0.625
Min–max range of strain means0   –   97.0   n
Mean sample size per strain3.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 86 125901.5989 1463.9721 3.1561 < 0.0001
Residuals 230 106685.1267 463.8484


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 0.5 0.707   2   0.5 1.41 -1.58
129X1/SvJ m 0.0 0.0   5 0.0 0.0 -1.6
A/J m 54.8 1.64   5 0.735 0.03 53.0, 57.0 0.97
AKR/J m 52.0 1.41   2   1.0 0.0272 51.0, 53.0 0.84
AXB15/PgnJ m 2.0 0.0   2   0.0 0.0 2.0, 2.0 -1.51
AXB19a/PgnJ m 0.5 0.707   2   0.5 1.41 -1.58
AXB1/PgnJ m 52.3 2.52   3 1.45 0.0481 50.0, 55.0 0.86
AXB23/PgnJ m 1.5 2.12   2   1.5 1.41 -1.53
AXB6/PgnJ m 54.0 0.0   1   0.0 0.0 54.0, 54.0 0.94
AXB8/PgnJ m 18.0 31.2   3 18.0 1.73 -0.75
BALB/cByJ m 51.8 1.6   6 0.654 0.0309 50.0, 54.0 0.83
BALB/cJ m 47.1 18.1   7 6.84 0.384 7.0, 61.0 0.61
BPL/1J m 44.8 24.8   5 11.1 0.554 1.0, 61.0 0.5
BTBR T+ Itpr3tf/J m 15.5 29.7   4 14.8 1.91 -0.87
BUB/BnJ m 59.0 7.07   2   5.0 0.12 54.0, 64.0 1.17
BXA13/PgnJ m 97.0 9.9   2   7.0 0.102 90.0, 104.0 2.95
BXA14/PgnJ m 11.8 21.4   5 9.56 1.81 1.0, 50.0 -1.05
BXA16/PgnJ m 1.75 2.87   4 1.44 1.64 -1.52
BXA25/PgnJ m 0.25 0.5   4 0.25 2.0 -1.59
BXA4/PgnJ m 0.0 0.0   1   0.0 0.0 -1.6
BXA7/PgnJ m 52.7 3.06   3 1.76 0.058 50.0, 56.0 0.87
BXD100/RwwJ m 37.0 31.2   3 18.0 0.843 1.0, 56.0 0.14
BXD1/TyJ m 18.7 31.5   3 18.2 1.69 -0.72
BXD24/TyJ m 54.2 6.65   4 3.33 0.123 45.0, 60.0 0.95
BXD29/Ty m 2.0 1.63   4 0.816 0.816 -1.51
BXD31/TyJ m 21.7 31.0   6 12.7 1.43 -0.58
BXD32/TyJ m 26.5 36.1   2   25.5 1.36 1.0, 52.0 -0.36
BXD39/TyJ m 1.0 0.707   5 0.316 0.707 -1.55
BXD40/TyJ m 46.8 30.8   4 15.4 0.66 1.0, 68.0 0.6
BXD42/TyJ m 39.3 30.6   11 9.23 0.78 0.25
BXD48a/RwwJ m 51.0 0.0   2   0.0 0.0 51.0, 51.0 0.8
BXD48/RwwJ m 21.8 27.6   5 12.4 1.27 -0.58
BXD51/RwwJ m 53.7 3.06   3 1.76 0.0569 51.0, 57.0 0.92
BXD60/RwwJ m 34.0 28.8   7 10.9 0.848 1.0, 60.0 0.0
BXD62/RwwJ m 34.3 29.8   3 17.2 0.867 0.01
BXD65/RwwJ m 35.3 26.7   6 10.9 0.756 1.0, 59.0 0.06
BXD66/RwwJ m 19.0 29.5   3 17.0 1.55 1.0, 53.0 -0.71
BXD68/RwwJ m 11.8 24.7   5 11.1 2.09 -1.05
BXD75/RwwJ m 46.8 23.3   6 9.52 0.498 0.6
BXD77/RwwJ m 18.0 29.5   3 17.0 1.64 -0.75
BXD84/RwwJ m 18.0 29.6   4 14.8 1.64 -0.75
BXD90/RwwJ m 26.0 35.4   2   25.0 1.36 1.0, 51.0 -0.38
BXD95/RwwJ m 28.5 40.3   2   28.5 1.41 -0.26
BXD9/TyJ m 60.2 11.3   5 5.06 0.188 52.0, 80.0 1.23
BXH19/TyJ m 28.5 37.5   2   26.5 1.31 2.0, 55.0 -0.26
BXH22/KccJ m 6.62 17.9   8 6.34 2.71 -1.29
BXH4/TyJ m 3.67 4.73   3 2.73 1.29 -1.43
BXH6/TyJ m 43.0 38.3   3 22.1 0.891 1.0, 76.0 0.42
BXH8/TyJ m 25.0 35.4   2   25.0 1.41 -0.43
BXH9/TyJ m 51.5 1.29   4 0.645 0.0251 50.0, 53.0 0.82
C3HeB/FeJ m 26.5 33.2   2   23.5 1.25 3.0, 50.0 -0.36
C3H/HeJ m 13.4 22.8   5 10.2 1.7 -0.97
C57BL/10J m 52.5 3.54   2   2.5 0.0673 50.0, 55.0 0.87
C57BL/6J m 15.4 22.5   9 7.49 1.45 -0.88
C57BLKS/J m 54.0 5.66   2   4.0 0.105 50.0, 58.0 0.94
C57BR/cdJ m 53.7 3.21   3 1.86 0.0599 50.0, 56.0 0.92
C57L/J m 54.5 0.707   2   0.5 0.013 54.0, 55.0 0.96
C58/J m 46.0 30.0   4 15.0 0.653 1.0, 63.0 0.56
CAST/EiJ m 51.3 1.15   3 0.667 0.0225 50.0, 52.0 0.81
CBA/J m 17.9 25.8   7 9.76 1.45 1.0, 59.0 -0.76
CE/J m 55.0 5.66   2   4.0 0.103 51.0, 59.0 0.98
CXB11/HiAJ m 54.8 1.71   4 0.854 0.0312 53.0, 57.0 0.97
CXB1/ByJ m 9.33 20.0   6 8.16 2.14 -1.16
CXB8/HiAJ m 57.5 10.6   2   7.5 0.184 50.0, 65.0 1.1
CXB9/HiAJ m 62.0 9.9   2   7.0 0.16 55.0, 69.0 1.31
DBA/1J m 2.5 0.707   2   0.5 0.283 2.0, 3.0 -1.48
DBA/2J m 34.2 27.8   5 12.5 0.814 0.01
DDY/JclSidSeyFrkJ m 40.0 17.0   2   12.0 0.424 28.0, 52.0 0.28
FVB/NJ m 29.0 31.2   6 12.7 1.07 -0.24
I/LnJ m 51.0 35.0   5 15.7 0.687 2.0, 101.0 0.8
ILS/IbgTejJ m 52.8 1.71   4 0.854 0.0324 51.0, 55.0 0.88
KK/HlJ m 52.0 2.83   2   2.0 0.0544 50.0, 54.0 0.84
LG/J m 55.5 3.7   4 1.85 0.0666 53.0, 61.0 1.01
LP/J m 18.7 31.5   3 18.2 1.69 -0.72
MA/MyJ m 18.0 28.6   3 16.5 1.59 1.0, 51.0 -0.75
MOLF/EiJ m 3.5 3.54   2   2.5 1.01 1.0, 6.0 -1.44
MRL/MpJ m 56.0 8.49   2   6.0 0.152 50.0, 62.0 1.03
NOD/ShiLtJ m 55.0 3.67   5 1.64 0.0668 51.0, 60.0 0.98
NON/ShiLtJ m 51.0 1.41   2   1.0 0.0277 50.0, 52.0 0.8
NOR/LtJ m 52.0 0.0   2   0.0 0.0 52.0, 52.0 0.84
NZB/BlNJ m 51.0 1.41   2   1.0 0.0277 50.0, 52.0 0.8
NZW/LacJ m 51.0 1.41   2   1.0 0.0277 50.0, 52.0 0.8
P/J m 50.0 0.0   2   0.0 0.0 50.0, 50.0 0.75
PL/J m 27.0 35.4   2   25.0 1.31 2.0, 52.0 -0.33
PWD/PhJ m 53.0 0.0   1   0.0 0.0 53.0, 53.0 0.89
RIIIS/J m 52.6 1.34   5 0.6 0.0255 51.0, 54.0 0.87
SEA/GnJ m 54.5 4.95   2   3.5 0.0908 51.0, 58.0 0.96
SJL/J m 21.8 26.2   5 11.7 1.2 1.0, 51.0 -0.58
SM/J m 52.7 1.53   3 0.882 0.029 51.0, 54.0 0.87
SWR/J m 2.0 1.41   2   1.0 0.707 1.0, 3.0 -1.51
ZALENDE/EiJ m 8.0 0.0   1   0.0 0.0 8.0, 8.0 -1.22


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.5 15.2291 30.5063 -29.5063
129X1/SvJ m 0.0 9.6317 18.9776 -18.9776
A/J m 54.8 9.6317 73.7776 35.8224
AKR/J m 52.0 15.2291 82.0063 21.9937
AXB15/PgnJ m 2.0 15.2291 32.0063 -28.0063
AXB19a/PgnJ m 0.5 15.2291 30.5063 -29.5063
AXB1/PgnJ m 52.3333 12.4345 76.8334 27.8333
AXB23/PgnJ m 1.5 15.2291 31.5063 -28.5063
AXB8/PgnJ m 18.0 12.4345 42.5 -6.5
BALB/cByJ m 51.8333 8.7925 69.1575 34.5092
BALB/cJ m 47.1429 8.1403 63.1819 31.1038
BPL/1J m 44.8 9.6317 63.7776 25.8224
BTBR T+ Itpr3tf/J m 15.5 10.7686 36.7177 -5.7177
BUB/BnJ m 59.0 15.2291 89.0063 28.9937
BXA13/PgnJ m 97.0 15.2291 127.0063 66.9937
BXA14/PgnJ m 11.8 9.6317 30.7776 -7.1776
BXA16/PgnJ m 1.75 10.7686 22.9677 -19.4677
BXA25/PgnJ m 0.25 10.7686 21.4677 -20.9677
BXA7/PgnJ m 52.6667 12.4345 77.1667 28.1666
BXD100/RwwJ m 37.0 12.4345 61.5 12.5
BXD1/TyJ m 18.6667 12.4345 43.1667 -5.8334
BXD24/TyJ m 54.25 10.7686 75.4677 33.0323
BXD29/Ty m 2.0 10.7686 23.2177 -19.2177
BXD31/TyJ m 21.6667 8.7925 38.9908 4.3425
BXD32/TyJ m 26.5 15.2291 56.5063 -3.5063
BXD39/TyJ m 1.0 9.6317 19.9776 -17.9776
BXD40/TyJ m 46.75 10.7686 67.9677 25.5323
BXD42/TyJ m 39.2727 6.4937 52.0675 26.478
BXD48a/RwwJ m 51.0 15.2291 81.0063 20.9937
BXD48/RwwJ m 21.8 9.6317 40.7776 2.8224
BXD51/RwwJ m 53.6667 12.4345 78.1667 29.1666
BXD60/RwwJ m 34.0 8.1403 50.039 17.961
BXD62/RwwJ m 34.3333 12.4345 58.8334 9.8333
BXD65/RwwJ m 35.3333 8.7925 52.6575 18.0092
BXD66/RwwJ m 19.0 12.4345 43.5 -5.5
BXD68/RwwJ m 11.8 9.6317 30.7776 -7.1776
BXD75/RwwJ m 46.8333 8.7925 64.1575 29.5092
BXD77/RwwJ m 18.0 12.4345 42.5 -6.5
BXD84/RwwJ m 18.0 10.7686 39.2177 -3.2177
BXD90/RwwJ m 26.0 15.2291 56.0063 -4.0063
BXD95/RwwJ m 28.5 15.2291 58.5063 -1.5063
BXD9/TyJ m 60.2 9.6317 79.1776 41.2224
BXH19/TyJ m 28.5 15.2291 58.5063 -1.5063
BXH22/KccJ m 6.625 7.6145 21.6281 -8.3781
BXH4/TyJ m 3.6667 12.4345 28.1667 -20.8334
BXH6/TyJ m 43.0 12.4345 67.5 18.5
BXH8/TyJ m 25.0 15.2291 55.0063 -5.0063
BXH9/TyJ m 51.5 10.7686 72.7177 30.2823
C3HeB/FeJ m 26.5 15.2291 56.5063 -3.5063
C3H/HeJ m 13.4 9.6317 32.3776 -5.5776
C57BL/10J m 52.5 15.2291 82.5063 22.4937
C57BL/6J m 15.4444 7.179 29.5895 1.2993
C57BLKS/J m 54.0 15.2291 84.0063 23.9937
C57BR/cdJ m 53.6667 12.4345 78.1667 29.1666
C57L/J m 54.5 15.2291 84.5063 24.4937
C58/J m 46.0 10.7686 67.2177 24.7823
CAST/EiJ m 51.3333 12.4345 75.8334 26.8333
CBA/J m 17.8571 8.1403 33.8962 1.8181
CE/J m 55.0 15.2291 85.0063 24.9937
CXB11/HiAJ m 54.75 10.7686 75.9677 33.5323
CXB1/ByJ m 9.3333 8.7925 26.6575 -7.9908
CXB8/HiAJ m 57.5 15.2291 87.5063 27.4937
CXB9/HiAJ m 62.0 15.2291 92.0063 31.9937
DBA/1J m 2.5 15.2291 32.5063 -27.5063
DBA/2J m 34.2 9.6317 53.1776 15.2224
DDY/JclSidSeyFrkJ m 40.0 15.2291 70.0063 9.9937
FVB/NJ m 29.0 8.7925 46.3241 11.6759
I/LnJ m 51.0 9.6317 69.9776 32.0224
ILS/IbgTejJ m 52.75 10.7686 73.9677 31.5323
KK/HlJ m 52.0 15.2291 82.0063 21.9937
LG/J m 55.5 10.7686 76.7177 34.2823
LP/J m 18.6667 12.4345 43.1667 -5.8334
MA/MyJ m 18.0 12.4345 42.5 -6.5
MOLF/EiJ m 3.5 15.2291 33.5063 -26.5063
MRL/MpJ m 56.0 15.2291 86.0063 25.9937
NOD/ShiLtJ m 55.0 9.6317 73.9776 36.0224
NON/ShiLtJ m 51.0 15.2291 81.0063 20.9937
NOR/LtJ m 52.0 15.2291 82.0063 21.9937
NZB/BlNJ m 51.0 15.2291 81.0063 20.9937
NZW/LacJ m 51.0 15.2291 81.0063 20.9937
P/J m 50.0 15.2291 80.0063 19.9937
PL/J m 27.0 15.2291 57.0063 -3.0063
RIIIS/J m 52.6 9.6317 71.5776 33.6224
SEA/GnJ m 54.5 15.2291 84.5063 24.4937
SJL/J m 21.8 9.6317 40.7776 2.8224
SM/J m 52.6667 12.4345 77.1667 28.1666
SWR/J m 2.0 15.2291 32.0063 -28.0063




  GWAS USING LINEAR MIXED MODELS