Project measure / variable:   CSNA01   FR1activeD1

ID, description, units MPD:60201   FR1activeD1   fixed ratio 1 (FR1), active lever presses, 8 h test   [n]  day 1  
sucrose study
Data set, strains CSNA01   HMDP   91 strains     sex: m     age: 7-22wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA01 - fixed ratio 1 (FR1), active lever presses, 8 h test day 1



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested91 strains
Mean of the strain means33.6   n
Median of the strain means36.5   n
SD of the strain means± 19.7
Coefficient of variation (CV)0.587
Min–max range of strain means0.800   –   70.5   n
Mean sample size per strain3.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 86 109308.3094 1271.0269 3.1524 < 0.0001
Residuals 230 92733.8925 403.1908


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 3.0 1.41   2   1.0 0.471 2.0, 4.0 -1.55
129X1/SvJ m 0.8 0.837   5 0.374 1.05 -1.66
A/J m 46.4 9.29   5 4.15 0.2 35.0, 55.0 0.65
AKR/J m 28.0 31.1   2   22.0 1.11 6.0, 50.0 -0.29
AXB15/PgnJ m 4.0 1.41   2   1.0 0.354 3.0, 5.0 -1.5
AXB19a/PgnJ m 3.0 4.24   2   3.0 1.41 -1.55
AXB1/PgnJ m 41.7 17.2   3 9.94 0.413 22.0, 54.0 0.41
AXB23/PgnJ m 9.5 10.6   2   7.5 1.12 2.0, 17.0 -1.22
AXB6/PgnJ m 51.0 0.0   1   0.0 0.0 51.0, 51.0 0.88
AXB8/PgnJ m 25.3 39.6   3 22.8 1.56 2.0, 71.0 -0.42
BALB/cByJ m 50.3 22.2   6 9.05 0.441 7.0, 68.0 0.84
BALB/cJ m 42.9 20.7   7 7.82 0.483 4.0, 59.0 0.47
BPL/1J m 44.2 21.4   5 9.59 0.485 6.0, 57.0 0.54
BTBR T+ Itpr3tf/J m 14.5 26.4   4 13.2 1.82 -0.97
BUB/BnJ m 60.0 1.41   2   1.0 0.0236 59.0, 61.0 1.34
BXA13/PgnJ m 70.5 2.12   2   1.5 0.0301 69.0, 72.0 1.87
BXA14/PgnJ m 13.6 21.6   5 9.66 1.59 -1.01
BXA16/PgnJ m 4.75 1.71   4 0.854 0.36 3.0, 7.0 -1.46
BXA25/PgnJ m 3.0 1.63   4 0.816 0.544 1.0, 5.0 -1.55
BXA4/PgnJ m 4.0 0.0   1   0.0 0.0 4.0, 4.0 -1.5
BXA7/PgnJ m 62.0 4.58   3 2.65 0.0739 57.0, 66.0 1.44
BXD100/RwwJ m 39.3 30.2   3 17.5 0.769 5.0, 62.0 0.29
BXD1/TyJ m 22.0 33.0   3 19.0 1.5 1.0, 60.0 -0.59
BXD24/TyJ m 45.8 14.6   4 7.28 0.318 24.0, 55.0 0.62
BXD29/Ty m 4.75 2.87   4 1.44 0.605 3.0, 9.0 -1.46
BXD31/TyJ m 18.7 25.2   6 10.3 1.35 -0.76
BXD32/TyJ m 27.5 36.1   2   25.5 1.31 2.0, 53.0 -0.31
BXD39/TyJ m 3.4 2.79   5 1.25 0.821 1.0, 8.0 -1.53
BXD40/TyJ m 42.2 25.5   4 12.8 0.604 4.0, 55.0 0.43
BXD42/TyJ m 38.0 27.2   11 8.2 0.715 0.22
BXD48a/RwwJ m 55.0 1.41   2   1.0 0.0257 54.0, 56.0 1.08
BXD48/RwwJ m 23.8 26.0   5 11.6 1.09 -0.5
BXD51/RwwJ m 52.3 0.577   3 0.333 0.011 52.0, 53.0 0.95
BXD60/RwwJ m 33.1 27.6   7 10.4 0.834 2.0, 57.0 -0.03
BXD62/RwwJ m 42.7 21.4   3 12.3 0.501 18.0, 56.0 0.46
BXD65/RwwJ m 38.3 29.3   6 12.0 0.764 4.0, 78.0 0.24
BXD66/RwwJ m 7.67 2.31   3 1.33 0.301 5.0, 9.0 -1.32
BXD68/RwwJ m 14.6 22.6   5 10.1 1.55 4.0, 55.0 -0.96
BXD75/RwwJ m 44.5 19.5   6 7.97 0.439 5.0, 56.0 0.55
BXD77/RwwJ m 20.7 26.5   3 15.3 1.28 2.0, 51.0 -0.66
BXD84/RwwJ m 23.0 33.0   4 16.5 1.43 1.0, 72.0 -0.54
BXD90/RwwJ m 26.5 37.5   2   26.5 1.41 -0.36
BXD95/RwwJ m 26.0 22.6   2   16.0 0.87 10.0, 42.0 -0.39
BXD9/TyJ m 60.0 5.66   5 2.53 0.0943 53.0, 66.0 1.34
BXH19/TyJ m 27.0 32.5   2   23.0 1.2 4.0, 50.0 -0.34
BXH22/KccJ m 9.38 17.8   8 6.3 1.9 -1.23
BXH4/TyJ m 8.33 11.9   3 6.89 1.43 -1.28
BXH6/TyJ m 39.3 34.0   3 19.6 0.865 1.0, 66.0 0.29
BXH8/TyJ m 5.0 4.24   2   3.0 0.849 2.0, 8.0 -1.45
BXH9/TyJ m 53.2 3.3   4 1.65 0.062 51.0, 58.0 0.99
C3HeB/FeJ m 4.5 0.707   2   0.5 0.157 4.0, 5.0 -1.48
C3H/HeJ m 14.2 21.1   5 9.45 1.49 4.0, 52.0 -0.98
C57BL/10J m 51.5 0.707   2   0.5 0.0137 51.0, 52.0 0.9
C57BL/6J m 16.6 20.7   9 6.91 1.25 2.0, 52.0 -0.86
C57BLKS/J m 53.0 4.24   2   3.0 0.08 50.0, 56.0 0.98
C57BR/cdJ m 48.7 30.1   3 17.4 0.619 17.0, 77.0 0.76
C57L/J m 55.5 4.95   2   3.5 0.0892 52.0, 59.0 1.11
C58/J m 58.0 13.4   4 6.68 0.23 38.0, 66.0 1.23
CAST/EiJ m 54.0 1.73   3 1.0 0.0321 52.0, 55.0 1.03
CBA/J m 20.4 23.3   7 8.8 1.14 1.0, 56.0 -0.67
CE/J m 54.0 2.83   2   2.0 0.0524 52.0, 56.0 1.03
CXB11/HiAJ m 53.2 2.22   4 1.11 0.0416 51.0, 56.0 0.99
CXB1/ByJ m 20.0 25.4   6 10.4 1.27 -0.69
CXB8/HiAJ m 54.0 5.66   2   4.0 0.105 50.0, 58.0 1.03
CXB9/HiAJ m 57.0 4.24   2   3.0 0.0744 54.0, 60.0 1.18
DBA/1J m 5.5 3.54   2   2.5 0.643 3.0, 8.0 -1.42
DBA/2J m 30.8 27.0   5 12.1 0.876 8.0, 65.0 -0.14
DDY/JclSidSeyFrkJ m 36.5 23.3   2   16.5 0.639 20.0, 53.0 0.15
FVB/NJ m 25.5 23.6   6 9.65 0.927 4.0, 58.0 -0.41
I/LnJ m 35.4 28.3   5 12.7 0.8 2.0, 59.0 0.09
ILS/IbgTejJ m 52.5 3.11   4 1.55 0.0592 50.0, 57.0 0.96
KK/HlJ m 51.0 1.41   2   1.0 0.0277 50.0, 52.0 0.88
LG/J m 53.0 3.46   4 1.73 0.0654 50.0, 56.0 0.98
LP/J m 21.3 26.7   3 15.4 1.25 3.0, 52.0 -0.62
MA/MyJ m 22.7 26.1   3 15.1 1.15 2.0, 52.0 -0.55
MOLF/EiJ m 12.0 12.7   2   9.0 1.06 3.0, 21.0 -1.1
MRL/MpJ m 51.0 1.41   2   1.0 0.0277 50.0, 52.0 0.88
NOD/ShiLtJ m 64.0 7.58   5 3.39 0.118 53.0, 72.0 1.54
NON/ShiLtJ m 50.5 0.707   2   0.5 0.014 50.0, 51.0 0.85
NOR/LtJ m 59.5 6.36   2   4.5 0.107 55.0, 64.0 1.31
NZB/BlNJ m 41.0 12.7   2   9.0 0.31 32.0, 50.0 0.37
NZW/LacJ m 51.0 1.41   2   1.0 0.0277 50.0, 52.0 0.88
P/J m 36.5 21.9   2   15.5 0.601 21.0, 52.0 0.15
PL/J m 28.5 34.6   2   24.5 1.22 4.0, 53.0 -0.26
PWD/PhJ m 53.0 0.0   1   0.0 0.0 53.0, 53.0 0.98
RIIIS/J m 55.0 3.08   5 1.38 0.056 50.0, 58.0 1.08
SEA/GnJ m 55.0 4.24   2   3.0 0.0771 52.0, 58.0 1.08
SJL/J m 7.4 3.51   5 1.57 0.474 4.0, 13.0 -1.33
SM/J m 48.7 10.1   3 5.81 0.207 38.0, 58.0 0.76
SWR/J m 3.5 2.12   2   1.5 0.606 2.0, 5.0 -1.53
ZALENDE/EiJ m 61.0 0.0   1   0.0 0.0 61.0, 61.0 1.39


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 3.0 14.1984 30.9756 0.0
129X1/SvJ m 0.8 8.9799 18.4933 0.0
A/J m 46.4 8.9799 64.0933 28.7067
AKR/J m 28.0 14.1984 55.9756 0.0244
AXB15/PgnJ m 4.0 14.1984 31.9756 0.0
AXB19a/PgnJ m 3.0 14.1984 30.9756 0.0
AXB1/PgnJ m 41.6667 11.593 64.5087 18.8247
AXB23/PgnJ m 9.5 14.1984 37.4756 0.0
AXB8/PgnJ m 25.3333 11.593 48.1753 2.4913
BALB/cByJ m 50.3333 8.1975 66.4851 34.1816
BALB/cJ m 42.8571 7.5894 57.8107 27.9035
BPL/1J m 44.2 8.9799 61.8933 26.5067
BTBR T+ Itpr3tf/J m 14.5 10.0398 34.2817 0.0
BUB/BnJ m 60.0 14.1984 87.9756 32.0244
BXA13/PgnJ m 70.5 14.1984 98.4756 42.5244
BXA14/PgnJ m 13.6 8.9799 31.2933 0.0
BXA16/PgnJ m 4.75 10.0398 24.5317 0.0
BXA25/PgnJ m 3.0 10.0398 22.7817 0.0
BXA7/PgnJ m 62.0 11.593 84.842 39.158
BXD100/RwwJ m 39.3333 11.593 62.1753 16.4913
BXD1/TyJ m 22.0 11.593 44.842 0.0
BXD24/TyJ m 45.75 10.0398 65.5317 25.9683
BXD29/Ty m 4.75 10.0398 24.5317 0.0
BXD31/TyJ m 18.6667 8.1975 34.8184 2.5149
BXD32/TyJ m 27.5 14.1984 55.4756 0.0
BXD39/TyJ m 3.4 8.9799 21.0933 0.0
BXD40/TyJ m 42.25 10.0398 62.0317 22.4683
BXD42/TyJ m 38.0 6.0542 49.9288 26.0712
BXD48a/RwwJ m 55.0 14.1984 82.9756 27.0244
BXD48/RwwJ m 23.8 8.9799 41.4933 6.1067
BXD51/RwwJ m 52.3333 11.593 75.1753 29.4913
BXD60/RwwJ m 33.1429 7.5894 48.0965 18.1893
BXD62/RwwJ m 42.6667 11.593 65.5087 19.8247
BXD65/RwwJ m 38.3333 8.1975 54.4851 22.1816
BXD66/RwwJ m 7.6667 11.593 30.5087 0.0
BXD68/RwwJ m 14.6 8.9799 32.2933 0.0
BXD75/RwwJ m 44.5 8.1975 60.6517 28.3483
BXD77/RwwJ m 20.6667 11.593 43.5087 0.0
BXD84/RwwJ m 23.0 10.0398 42.7817 3.2183
BXD90/RwwJ m 26.5 14.1984 54.4756 0.0
BXD95/RwwJ m 26.0 14.1984 53.9756 0.0
BXD9/TyJ m 60.0 8.9799 77.6933 42.3067
BXH19/TyJ m 27.0 14.1984 54.9756 0.0
BXH22/KccJ m 9.375 7.0992 23.3628 0.0
BXH4/TyJ m 8.3333 11.593 31.1753 0.0
BXH6/TyJ m 39.3333 11.593 62.1753 16.4913
BXH8/TyJ m 5.0 14.1984 32.9756 0.0
BXH9/TyJ m 53.25 10.0398 73.0317 33.4683
C3HeB/FeJ m 4.5 14.1984 32.4756 0.0
C3H/HeJ m 14.2 8.9799 31.8933 0.0
C57BL/10J m 51.5 14.1984 79.4756 23.5244
C57BL/6J m 16.5556 6.6932 29.7434 3.3677
C57BLKS/J m 53.0 14.1984 80.9756 25.0244
C57BR/cdJ m 48.6667 11.593 71.5087 25.8247
C57L/J m 55.5 14.1984 83.4756 27.5244
C58/J m 58.0 10.0398 77.7817 38.2183
CAST/EiJ m 54.0 11.593 76.842 31.158
CBA/J m 20.4286 7.5894 35.3822 5.475
CE/J m 54.0 14.1984 81.9756 26.0244
CXB11/HiAJ m 53.25 10.0398 73.0317 33.4683
CXB1/ByJ m 20.0 8.1975 36.1517 3.8483
CXB8/HiAJ m 54.0 14.1984 81.9756 26.0244
CXB9/HiAJ m 57.0 14.1984 84.9756 29.0244
DBA/1J m 5.5 14.1984 33.4756 0.0
DBA/2J m 30.8 8.9799 48.4933 13.1067
DDY/JclSidSeyFrkJ m 36.5 14.1984 64.4756 8.5244
FVB/NJ m 25.5 8.1975 41.6517 9.3483
I/LnJ m 35.4 8.9799 53.0933 17.7067
ILS/IbgTejJ m 52.5 10.0398 72.2817 32.7183
KK/HlJ m 51.0 14.1984 78.9756 23.0244
LG/J m 53.0 10.0398 72.7817 33.2183
LP/J m 21.3333 11.593 44.1753 0.0
MA/MyJ m 22.6667 11.593 45.5087 0.0
MOLF/EiJ m 12.0 14.1984 39.9756 0.0
MRL/MpJ m 51.0 14.1984 78.9756 23.0244
NOD/ShiLtJ m 64.0 8.9799 81.6933 46.3067
NON/ShiLtJ m 50.5 14.1984 78.4756 22.5244
NOR/LtJ m 59.5 14.1984 87.4756 31.5244
NZB/BlNJ m 41.0 14.1984 68.9756 13.0244
NZW/LacJ m 51.0 14.1984 78.9756 23.0244
P/J m 36.5 14.1984 64.4756 8.5244
PL/J m 28.5 14.1984 56.4756 0.5244
RIIIS/J m 55.0 8.9799 72.6933 37.3067
SEA/GnJ m 55.0 14.1984 82.9756 27.0244
SJL/J m 7.4 8.9799 25.0933 0.0
SM/J m 48.6667 11.593 71.5087 25.8247
SWR/J m 3.5 14.1984 31.4756 0.0




  GWAS USING LINEAR MIXED MODELS