Project measure / variable:   Kliethermes1   dips_OP

ID, description, units MPD:59940   dips_OP   number of head dips in object preference task to assess novelty seeking, 10 min test   [n]  
Data set, strains Kliethermes1   inbred   14 strains     sex: both     age: 8wks
Procedure hole board test
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  STRAIN COMPARISON PLOT
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Kliethermes1 - number of head dips in object preference task to assess novelty seeking, 10 min test



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested14 strains14 strains
Mean of the strain means105   n 94.6   n
Median of the strain means97.3   n 91.0   n
SD of the strain means± 61.9 ± 52.1
Coefficient of variation (CV)0.592 0.551
Min–max range of strain means13.0   –   222   n 18.0   –   185   n
Mean sample size per strain6.3   mice 6.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2559.6774 2559.6774 0.8531 0.3571
strain 13 469631.6847 36125.5142 12.0405 < 0.0001
sex:strain 13 37487.2336 2883.6334 0.9611 0.4921
Residuals 158 474052.8667 3000.3346


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 15.3 14.4   6 5.88 0.939 -1.44
129S1/SvImJ m 37.7 23.2   6 9.49 0.617 12.0, 74.0 -1.09
A/J f 13.0 13.5   6 5.53 1.04 -1.48
A/J m 38.3 8.33   6 3.4 0.217 28.0, 46.0 -1.08
AKR/J f 141.0 55.2   6 22.5 0.392 50.0, 200.0 0.59
AKR/J m 102.0 27.9   6 11.4 0.274 64.0, 142.0 0.14
BALB/cByJ f 75.2 40.8   5 18.2 0.543 36.0, 126.0 -0.48
BALB/cByJ m 18.0 9.38   6 3.83 0.521 -1.47
BTBR T+ Itpr3tf/J f 56.7 31.3   6 12.8 0.553 22.0, 104.0 -0.77
BTBR T+ Itpr3tf/J m 41.7 14.8   6 6.05 0.356 30.0, 68.0 -1.02
C3H/HeJ f 108.0 34.3   6 14.0 0.317 62.0, 152.0 0.05
C3H/HeJ m 132.0 65.9   6 26.9 0.498 52.0, 210.0 0.72
C57BL/6J f 68.0 29.8   12 8.62 0.439 32.0, 130.0 -0.59
C57BL/6J m 69.3 40.4   12 11.7 0.583 8.0, 120.0 -0.49
C57L/J f 107.0 35.6   6 14.5 0.333 52.0, 158.0 0.04
C57L/J m 123.0 51.3   6 20.9 0.418 54.0, 198.0 0.54
DBA/2J f 87.7 26.9   12 7.76 0.307 54.0, 144.0 -0.27
DBA/2J m 104.0 44.2   12 12.8 0.426 34.0, 208.0 0.18
FVB/NJ f 176.0 59.0   6 24.1 0.335 96.0, 276.0 1.15
FVB/NJ m 185.0 212.0   6 86.5 1.15 64.0, 610.0 1.73
NOD/ShiLtJ f 192.0 63.4   5 28.3 0.33 116.0, 276.0 1.41
NOD/ShiLtJ m 142.0 50.5   6 20.6 0.355 72.0, 212.0 0.91
NZB/BlNJ f 81.3 79.4   6 32.4 0.976 16.0, 232.0 -0.38
NZB/BlNJ m 80.0 30.9   6 12.6 0.386 58.0, 140.0 -0.28
PERA/EiJ f 122.0 30.9   5 13.8 0.253 70.0, 150.0 0.28
PERA/EiJ m 77.5 37.6   4 18.8 0.486 36.0, 120.0 -0.33
PL/J f 222.0 44.7   6 18.3 0.201 154.0, 284.0 1.89
PL/J m 174.0 43.0   5 19.2 0.248 110.0, 228.0 1.52


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 15.3333 22.3619 59.5002 -28.8335
129S1/SvImJ m 37.6667 22.3619 81.8335 -6.5002
A/J f 13.0 22.3619 57.1669 -31.1669
A/J m 38.3333 22.3619 82.5002 -5.8335
AKR/J f 140.6667 22.3619 184.8335 96.4998
AKR/J m 101.6667 22.3619 145.8335 57.4998
BALB/cByJ f 75.2 24.4963 123.5824 26.8176
BALB/cByJ m 18.0 22.3619 62.1669 -26.1669
BTBR T+ Itpr3tf/J f 56.6667 22.3619 100.8335 12.4998
BTBR T+ Itpr3tf/J m 41.6667 22.3619 85.8335 -2.5002
C3H/HeJ f 108.3333 22.3619 152.5002 64.1665
C3H/HeJ m 132.3333 22.3619 176.5002 88.1665
C57BL/6J f 68.0 15.8123 99.2307 36.7693
C57BL/6J m 69.3333 15.8123 100.564 38.1026
C57L/J f 107.0 22.3619 151.1669 62.8331
C57L/J m 122.6667 22.3619 166.8335 78.4998
DBA/2J f 87.6667 15.8123 118.8974 56.436
DBA/2J m 103.6667 15.8123 134.8974 72.436
FVB/NJ f 176.3333 22.3619 220.5002 132.1665
FVB/NJ m 184.6667 22.3619 228.8335 140.4998
NOD/ShiLtJ f 192.0 24.4963 240.3824 143.6176
NOD/ShiLtJ m 142.3333 22.3619 186.5002 98.1665
NZB/BlNJ f 81.3333 22.3619 125.5002 37.1665
NZB/BlNJ m 80.0 22.3619 124.1669 35.8331
PERA/EiJ f 122.4 24.4963 170.7824 74.0176
PERA/EiJ m 77.5 27.3877 131.5931 23.4069
PL/J f 222.0 22.3619 266.1669 177.8331
PL/J m 173.6 24.4963 221.9824 125.2176


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 26.5 15.8123 57.7307 -4.7307
A/J both 25.6667 15.8123 56.8974 -5.564
AKR/J both 121.1667 15.8123 152.3974 89.936
BALB/cByJ both 46.6 16.584 79.355 13.845
BTBR T+ Itpr3tf/J both 49.1667 15.8123 80.3974 17.936
C3H/HeJ both 120.3333 15.8123 151.564 89.1026
C57BL/6J both 68.6667 11.181 90.7501 46.5832
C57L/J both 114.8333 15.8123 146.064 83.6026
DBA/2J both 95.6667 11.181 117.7501 73.5832
FVB/NJ both 180.5 15.8123 211.7307 149.2693
NOD/ShiLtJ both 167.1667 16.584 199.9217 134.4116
NZB/BlNJ both 80.6667 15.8123 111.8974 49.436
PERA/EiJ both 99.95 18.3722 136.2368 63.6632
PL/J both 197.8 16.584 230.555 165.045




  GWAS USING LINEAR MIXED MODELS