Phenotype measure:   Kliethermes1   regression_MS

ID, description, units MPD:59904   regression_MS   residual score from regression of rears on horizontal activity in a task to assess novelty seeking, 30 min test   [score]
Data set, strains Kliethermes1   inbred   14 strains     sex: both     age: 8wks
Procedure monitoring system
Ontology mappings

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Kliethermes1 - residual score from regression of rears on horizontal activity in a task to assess novelty seeking, 30 min test



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested14 strains14 strains
Mean of the strain means-3.95   score 15.4   score
Median of the strain means-32.9   score 28.4   score
SD of the strain means± 166 ± 139
Coefficient of variation (CV)-42.1 9.03
Min–max range of strain means-194   –   386   score -161   –   331   score
Mean sample size per strain6.5   mice 6.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 17356.6042 17356.6042 2.2736 0.1336
strain 13 3851811.8653 296293.2204 38.8128 < 0.0001
sex:strain 13 122477.8367 9421.3721 1.2341 0.2597
Residuals 160 1221423.3732 7633.8961


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f -90.6 68.4   6 27.9 -0.754 -179.0, 16.1 -0.52
129S1/SvImJ m -97.0 52.5   6 21.4 -0.542 -151.0, -3.96 -0.81
A/J f 13.0 28.5   6 11.6 2.19 -18.3, 53.0 0.1
A/J m 20.0 24.2   6 9.86 1.21 -11.5, 48.8 0.03
AKR/J f -153.0 47.6   6 19.4 -0.312 -206.0, -75.7 -0.9
AKR/J m -74.5 35.1   6 14.3 -0.471 -141.0, -35.9 -0.65
BALB/cByJ f -78.7 57.0   6 23.3 -0.725 -147.0, 0.382 -0.45
BALB/cByJ m 36.7 33.4   6 13.7 0.912 5.86, 89.6 0.15
BTBR T+ Itpr3tf/J f -194.0 61.7   6 25.2 -0.318 -289.0, -131.0 -1.14
BTBR T+ Itpr3tf/J m -133.0 98.1   6 40.1 -0.74 -213.0, 44.3 -1.07
C3H/HeJ f 77.5 72.0   6 29.4 0.93 -19.1, 190.0 0.49
C3H/HeJ m 83.9 81.5   6 33.3 0.971 -27.6, 175.0 0.49
C57BL/6J f -184.0 81.9   12 23.6 -0.444 -308.0, -75.4 -1.08
C57BL/6J m -83.3 89.1   12 25.7 -1.07 -310.0, 19.9 -0.71
C57L/J f -115.0 85.3   6 34.8 -0.739 -279.0, -50.4 -0.67
C57L/J m -136.0 145.0   6 59.2 -1.07 -232.0, 144.0 -1.09
DBA/2J f 90.2 47.7   12 13.8 0.528 24.1, 180.0 0.57
DBA/2J m 76.6 78.9   9 26.3 1.03 -31.6, 237.0 0.44
FVB/NJ f 386.0 102.0   6 41.8 0.265 286.0, 582.0 2.34
FVB/NJ m 331.0 173.0   6 70.8 0.523 45.1, 550.0 2.27
NOD/ShiLtJ f 186.0 142.0   6 58.2 0.767 19.7, 354.0 1.14
NOD/ShiLtJ m 167.0 140.0   6 57.0 0.838 32.2, 416.0 1.09
NZB/BlNJ f -148.0 60.5   6 24.7 -0.409 -197.0, -34.3 -0.87
NZB/BlNJ m -161.0 59.5   6 24.3 -0.369 -241.0, -91.1 -1.27
PERA/EiJ f 22.3 67.4   6 27.5 3.03 -37.5, 105.0 0.16
PERA/EiJ m 59.5 64.7   6 26.4 1.09 -11.9, 171.0 0.32
PL/J f 133.0 94.3   6 38.5 0.708 -32.7, 240.0 0.82
PL/J m 126.0 165.0   5 73.6 1.3 0.56, 354.0 0.79


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f -90.6433 35.6695 -20.1995 -161.0872
129S1/SvImJ m -96.9833 35.6695 -26.5395 -167.4272
A/J f 13.0014 35.6695 83.4453 -57.4424
A/J m 20.0275 35.6695 90.4713 -50.4163
AKR/J f -152.6933 35.6695 -82.2495 -223.1372
AKR/J m -74.4767 35.6695 -4.0328 -144.9205
BALB/cByJ f -78.703 35.6695 -8.2592 -149.1469
BALB/cByJ m 36.656 35.6695 107.0998 -33.7878
BTBR T+ Itpr3tf/J f -193.9667 35.6695 -123.5228 -264.4105
BTBR T+ Itpr3tf/J m -132.6833 35.6695 -62.2395 -203.1272
C3H/HeJ f 77.4667 35.6695 147.9105 7.0228
C3H/HeJ m 83.935 35.6695 154.3788 13.4912
C57BL/6J f -184.3242 25.2222 -134.5129 -234.1355
C57BL/6J m -83.3341 25.2222 -33.5228 -133.1454
C57L/J f -115.4483 35.6695 -45.0045 -185.8922
C57L/J m -135.6 35.6695 -65.1562 -206.0438
DBA/2J f 90.2275 25.2222 140.0388 40.4162
DBA/2J m 76.5584 29.1241 134.0756 19.0413
FVB/NJ f 385.55 35.6695 455.9938 315.1062
FVB/NJ m 331.37 35.6695 401.8138 260.9262
NOD/ShiLtJ f 185.6983 35.6695 256.1422 115.2545
NOD/ShiLtJ m 166.65 35.6695 237.0938 96.2062
NZB/BlNJ f -147.99 35.6695 -77.5462 -218.4338
NZB/BlNJ m -161.4667 35.6695 -91.0228 -231.9105
PERA/EiJ f 22.255 35.6695 92.6988 -48.1888
PERA/EiJ m 59.525 35.6695 129.9688 -10.9188
PL/J f 133.165 35.6695 203.6088 62.7212
PL/J m 126.4467 39.074 203.614 49.2793


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both -93.8133 25.2222 -44.002 -143.6246
A/J both 16.5145 25.2222 66.3258 -33.2968
AKR/J both -113.585 25.2222 -63.7737 -163.3963
BALB/cByJ both -21.0235 25.2222 28.7878 -70.8348
BTBR T+ Itpr3tf/J both -163.325 25.2222 -113.5137 -213.1363
C3H/HeJ both 80.7008 25.2222 130.5121 30.8895
C57BL/6J both -133.8291 17.8348 -98.6072 -169.051
C57L/J both -125.5242 25.2222 -75.7129 -175.3355
DBA/2J both 83.393 19.2638 121.437 45.349
FVB/NJ both 358.46 25.2222 408.2713 308.6487
NOD/ShiLtJ both 176.1742 25.2222 225.9855 126.3629
NZB/BlNJ both -154.7283 25.2222 -104.917 -204.5396
PERA/EiJ both 40.89 25.2222 90.7013 -8.9213
PL/J both 129.8058 26.4532 182.0484 77.5633




  GWAS USING LINEAR MIXED MODELS