Project measure / variable:   Kliethermes1   num_rears_MS

ID, description, units MPD:59902   num_rears_MS   number of rears in a task to assess novelty seeking, 30 min test   [n]  
Data set, strains Kliethermes1   inbred   14 strains     sex: both     age: 8wks
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  STRAIN COMPARISON PLOT
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Kliethermes1 - number of rears in a task to assess novelty seeking, 30 min test



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested14 strains14 strains
Mean of the strain means291   n 316   n
Median of the strain means234   n 285   n
SD of the strain means± 244 ± 199
Coefficient of variation (CV)0.839 0.630
Min–max range of strain means4.83   –   858   n 65.0   –   777   n
Mean sample size per strain6.5   mice 6.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 30945.2625 30945.2625 3.5855 0.0601
strain 13 7560054.4396 581542.6492 67.3811 < 0.0001
sex:strain 13 203098.5022 15622.9617 1.8102 0.0455
Residuals 160 1380904.45 8630.6528


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 4.83 6.94   6 2.83 1.44 -1.17
129S1/SvImJ m 81.5 72.2   6 29.5 0.885 -1.18
A/J f 44.5 38.6   6 15.8 0.868 -1.01
A/J m 65.0 49.1   6 20.0 0.755 10.0, 132.0 -1.26
AKR/J f 174.0 55.8   6 22.8 0.322 111.0, 251.0 -0.48
AKR/J m 225.0 44.7   6 18.2 0.198 166.0, 273.0 -0.46
BALB/cByJ f 146.0 108.0   6 44.0 0.739 9.0, 293.0 -0.59
BALB/cByJ m 323.0 91.3   6 37.3 0.283 231.0, 496.0 0.03
BTBR T+ Itpr3tf/J f 164.0 82.2   6 33.5 0.501 61.0, 301.0 -0.52
BTBR T+ Itpr3tf/J m 232.0 129.0   6 52.8 0.557 74.0, 427.0 -0.42
C3H/HeJ f 251.0 63.4   6 25.9 0.252 189.0, 366.0 -0.16
C3H/HeJ m 262.0 108.0   6 44.1 0.413 112.0, 413.0 -0.27
C57BL/6J f 226.0 49.0   12 14.1 0.217 131.0, 284.0 -0.27
C57BL/6J m 308.0 62.3   12 18.0 0.202 195.0, 417.0 -0.04
C57L/J f 384.0 113.0   6 46.2 0.295 306.0, 598.0 0.38
C57L/J m 338.0 93.8   6 38.3 0.277 221.0, 484.0 0.11
DBA/2J f 331.0 79.5   12 22.9 0.24 211.0, 501.0 0.16
DBA/2J m 355.0 81.2   9 27.1 0.229 221.0, 494.0 0.2
FVB/NJ f 858.0 106.0   6 43.1 0.123 756.0, 1053.0 2.32
FVB/NJ m 777.0 200.0   6 81.7 0.258 491.0, 1089.0 2.32
NOD/ShiLtJ f 728.0 176.0   6 71.7 0.241 458.0, 945.0 1.79
NOD/ShiLtJ m 645.0 145.0   6 59.2 0.225 528.0, 897.0 1.65
NZB/BlNJ f 104.0 66.0   6 26.9 0.631 21.0, 222.0 -0.77
NZB/BlNJ m 159.0 38.7   6 15.8 0.243 87.0, 195.0 -0.79
PERA/EiJ f 241.0 42.3   6 17.3 0.176 167.0, 275.0 -0.21
PERA/EiJ m 202.0 81.1   6 33.1 0.401 92.0, 333.0 -0.57
PL/J f 420.0 99.2   6 40.5 0.236 308.0, 585.0 0.53
PL/J m 452.0 141.0   5 62.8 0.311 281.0, 622.0 0.68


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 4.8333 37.9268 79.735 -70.0684
129S1/SvImJ m 81.5 37.9268 156.4017 6.5983
A/J f 44.5 37.9268 119.4017 -30.4017
A/J m 65.0 37.9268 139.9017 -9.9017
AKR/J f 173.6667 37.9268 248.5684 98.765
AKR/J m 225.1667 37.9268 300.0684 150.265
BALB/cByJ f 146.0 37.9268 220.9017 71.0983
BALB/cByJ m 322.8333 37.9268 397.735 247.9316
BTBR T+ Itpr3tf/J f 163.8333 37.9268 238.735 88.9316
BTBR T+ Itpr3tf/J m 232.3333 37.9268 307.235 157.4316
C3H/HeJ f 251.1667 37.9268 326.0684 176.265
C3H/HeJ m 261.5 37.9268 336.4017 186.5983
C57BL/6J f 225.8333 26.8183 278.7968 172.8698
C57BL/6J m 307.9167 26.8183 360.8802 254.9532
C57L/J f 383.8333 37.9268 458.735 308.9316
C57L/J m 338.0 37.9268 412.9017 263.0983
DBA/2J f 331.1667 26.8183 384.1302 278.2032
DBA/2J m 354.6667 30.9671 415.8236 293.5097
FVB/NJ f 857.6667 37.9268 932.5684 782.765
FVB/NJ m 776.8333 37.9268 851.735 701.9316
NOD/ShiLtJ f 727.6667 37.9268 802.5684 652.765
NOD/ShiLtJ m 644.8333 37.9268 719.735 569.9316
NZB/BlNJ f 104.5 37.9268 179.4017 29.5983
NZB/BlNJ m 159.0 37.9268 233.9017 84.0983
PERA/EiJ f 240.8333 37.9268 315.735 165.9316
PERA/EiJ m 202.1667 37.9268 277.0684 127.265
PL/J f 420.3333 37.9268 495.235 345.4316
PL/J m 451.6 41.5467 533.6507 369.5493


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 43.1667 26.8183 96.1302 -9.7968
A/J both 54.75 26.8183 107.7135 1.7865
AKR/J both 199.4167 26.8183 252.3802 146.4532
BALB/cByJ both 234.4167 26.8183 287.3802 181.4532
BTBR T+ Itpr3tf/J both 198.0833 26.8183 251.0468 145.1198
C3H/HeJ both 256.3333 26.8183 309.2968 203.3698
C57BL/6J both 266.875 18.9634 304.3258 229.4242
C57L/J both 360.9167 26.8183 413.8802 307.9532
DBA/2J both 342.9167 20.4828 383.3682 302.4651
FVB/NJ both 817.25 26.8183 870.2135 764.2865
NOD/ShiLtJ both 686.25 26.8183 739.2135 633.2865
NZB/BlNJ both 131.75 26.8183 184.7135 78.7865
PERA/EiJ both 221.5 26.8183 274.4635 168.5365
PL/J both 435.9667 28.1273 491.5153 380.4181




  GWAS USING LINEAR MIXED MODELS