Project measure / variable:   Schughart4   WBC_trt_d5

ID, description, units MPD:58744   WBC_trt_d5   white blood cell count (WBC; per volume x 103), treated group   [n/µL]  post-infection day 5  
influenza A (H3N2) virus study
Data set, strains Schughart4   inbred w/CC8   8 strains     sex: f     age: 8-12wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Schughart4 - white blood cell count (WBC; per volume x 103), treated group post-infection day 5



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested8 strains
Mean of the strain means4.34   n/µL
Median of the strain means3.74   n/µL
SD of the strain means± 1.89
Coefficient of variation (CV)0.435
Min–max range of strain means2.49   –   7.57   n/µL
Mean sample size per strain7.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 201.4393 28.777 2.8876 0.0132
Residuals 49 488.3197 9.9657


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 3.17 0.683   5 0.305 0.215 2.52, 3.94 -0.62
A/J f 2.49 0.698   6 0.285 0.28 1.73, 3.57 -0.98
C57BL/6J f 7.57 5.15   11 1.55 0.68 2.91, 18.0 1.71
CAST/EiJ f 4.26 1.96   10 0.619 0.46 1.65, 7.78 -0.04
NOD/ShiLtJ f 3.48 1.26   6 0.514 0.362 1.87, 4.86 -0.45
NZO/HlLtJ f 3.99 2.06   6 0.84 0.515 2.29, 7.28 -0.18
PWK/PhJ f 6.9 4.69   8 1.66 0.68 2.03, 13.5 1.36
WSB/EiJ f 2.83 0.521   5 0.233 0.184 2.06, 3.36 -0.8


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 3.168 1.4118 6.0051 0.3309
A/J f 2.495 1.2888 5.0849 0.0
C57BL/6J f 7.5709 0.9518 9.4837 5.6581
CAST/EiJ f 4.256 0.9983 6.2621 2.2499
NOD/ShiLtJ f 3.485 1.2888 6.0749 0.8951
NZO/HlLtJ f 3.995 1.2888 6.5849 1.4051
PWK/PhJ f 6.9025 1.1161 9.1454 4.6596
WSB/EiJ f 2.834 1.4118 5.6711 0.0




  GWAS USING LINEAR MIXED MODELS