Project measure / variable:   Schughart3   pctbwA_d13

ID, description, units MPD:57123   pctbwA_d13   body weight as percent of baseline, 10 FFU group   [%]  post-infection day 13  
influenza A (H3N2) virus study
Data set, strains Schughart3   inbred w/CC8   5 strains     sex: both     age: 7-13wks
Procedure body weight
Ontology mappings

  STRAIN COMPARISON PLOT
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Schughart3 - body weight as percent of baseline, 10 FFU group post-infection day 13



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested5 strains5 strains
Mean of the strain means86.5   % 91.1   %
Median of the strain means85.8   % 91.7   %
SD of the strain means± 11.0 ± 6.17
Coefficient of variation (CV)0.127 0.0678
Min–max range of strain means72.2   –   98.0   % 82.1   –   98.0   %
Mean sample size per strain6.4   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.5079 0.5079 0.0103 0.9194
strain 4 2373.908 593.477 12.0735 < 0.0001
sex:strain 4 790.0098 197.5024 4.0179 0.0057
Residuals 64 3145.9546 49.1555


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 72.2 1.79   2   1.27 0.0248 70.9, 73.5 -1.3
129S1/SvImJ m 88.4 10.5   5 4.68 0.118 77.5, 103.0 -0.43
C57BL/6J f 85.8 7.78   4 3.89 0.0907 78.9, 93.7 -0.06
C57BL/6J m 82.1 8.95   5 4.0 0.109 73.5, 94.7 -1.45
NOD/ShiLtJ f 79.8 9.05   4 4.53 0.113 70.5, 92.2 -0.61
NOD/ShiLtJ m 91.7 8.79   13 2.44 0.0959 73.7, 107.0 0.1
NZO/HlLtJ f 96.7 5.23   10 1.65 0.054 86.7, 105.0 0.93
NZO/HlLtJ m 98.0 4.76   9 1.59 0.0485 91.9, 107.0 1.12
PWK/PhJ f 98.0 4.99   12 1.44 0.0509 91.7, 108.0 1.04
PWK/PhJ m 95.1 6.05   10 1.91 0.0636 87.8, 104.0 0.65


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 72.185 4.9576 82.0889 62.2811
129S1/SvImJ m 88.422 3.1355 94.6858 82.1582
C57BL/6J f 85.785 3.5056 92.7881 78.7819
C57BL/6J m 82.082 3.1355 88.3458 75.8182
NOD/ShiLtJ f 79.79 3.5056 86.7931 72.7869
NOD/ShiLtJ m 91.7015 1.9445 95.5862 87.8169
NZO/HlLtJ f 96.684 2.2171 101.1132 92.2548
NZO/HlLtJ m 98.0422 2.337 102.711 93.3735
PWK/PhJ f 97.9958 2.0239 102.0391 93.9526
PWK/PhJ m 95.117 2.2171 99.5462 90.6878


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 80.3035 2.933 86.1627 74.4443
C57BL/6J both 83.9335 2.3516 88.6314 79.2356
NOD/ShiLtJ both 85.7458 2.0044 89.75 81.7416
NZO/HlLtJ both 97.3631 1.6107 100.5808 94.1454
PWK/PhJ both 96.5564 1.501 99.555 93.5579




  GWAS USING LINEAR MIXED MODELS