Project measure / variable:   Schughart3   pctbwA_d11

ID, description, units MPD:57121   pctbwA_d11   body weight as percent of baseline, 10 FFU group   [%]  post-infection day 11  
influenza A (H3N2) virus study
Data set, strains Schughart3   inbred w/CC8   6 strains     sex: both     age: 7-13wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Schughart3 - body weight as percent of baseline, 10 FFU group post-infection day 11



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested5 strains6 strains
Mean of the strain means82.8   % 84.7   %
Median of the strain means76.2   % 83.3   %
SD of the strain means± 11.4 ± 9.11
Coefficient of variation (CV)0.138 0.108
Min–max range of strain means72.7   –   96.3   % 73.4   –   95.6   %
Mean sample size per strain6.8   mice 7.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.2231 0.2231 0.0052 0.9427
strain 4 4907.6849 1226.9212 28.5887 < 0.0001
sex:strain 4 368.8066 92.2016 2.1484 0.0844
Residuals 67 2875.3885 42.9162


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 72.7 1.38   3 0.798 0.019 71.9, 74.3 -0.89
129S1/SvImJ m 82.0 11.4   6 4.65 0.139 71.8, 101.0 -0.29
C57BL/6J f 76.2 5.64   4 2.82 0.074 70.8, 81.3 -0.58
C57BL/6J m 77.3 5.24   5 2.34 0.0678 72.8, 85.5 -0.81
NOD/ShiLtJ f 74.8 2.18   5 0.976 0.0292 71.7, 76.7 -0.7
NOD/ShiLtJ m 84.7 9.88   13 2.74 0.117 73.4, 106.0 0.0
NZO/HlLtJ f 94.1 3.87   10 1.22 0.0411 87.9, 100.0 0.99
NZO/HlLtJ m 95.6 4.67   9 1.56 0.0489 88.9, 104.0 1.2
PWK/PhJ f 96.3 4.99   12 1.44 0.0518 89.7, 106.0 1.18
PWK/PhJ m 95.0 5.18   10 1.64 0.0545 89.9, 104.0 1.13
WSB/EiJ m 73.4 0.0   1   0.0 0.0 73.4, 73.4 -1.24


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 72.7467 3.7823 80.2961 65.1973
129S1/SvImJ m 81.975 2.6745 87.3132 76.6368
C57BL/6J f 76.225 3.2755 82.763 69.687
C57BL/6J m 77.314 2.9297 83.1617 71.4663
NOD/ShiLtJ f 74.79 2.9297 80.6377 68.9423
NOD/ShiLtJ m 84.73 1.8169 88.3566 81.1034
NZO/HlLtJ f 94.107 2.0716 98.242 89.972
NZO/HlLtJ m 95.6422 2.1837 100.0009 91.2836
PWK/PhJ f 96.3167 1.8911 100.0914 92.542
PWK/PhJ m 95.045 2.0716 99.18 90.91


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 77.3608 2.3161 81.9839 72.7378
C57BL/6J both 76.7695 2.1973 81.1553 72.3837
NOD/ShiLtJ both 79.76 1.7237 83.2005 76.3195
NZO/HlLtJ both 94.8746 1.505 97.8786 91.8706
PWK/PhJ both 95.6808 1.4025 98.4802 92.8814




  GWAS USING LINEAR MIXED MODELS