Project measure / variable:   Schughart3   bwB

ID, description, units MPD:57102   bwB   body weight pre-infection   [g]  2000 FFU group  
Data set, strains Schughart3   inbred w/CC8   8 strains     sex: both     age: 7-13wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Schughart3 - body weight pre-infection 2000 FFU group



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means21.8   g 25.4   g
Median of the strain means20.8   g 24.6   g
SD of the strain means± 9.18 ± 9.69
Coefficient of variation (CV)0.421 0.382
Min–max range of strain means14.0   –   42.5   g 15.7   –   46.4   g
Mean sample size per strain10.1   mice 10.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 512.6722 512.6722 73.8802 < 0.0001
strain 7 12702.2117 1814.6017 261.4987 < 0.0001
sex:strain 7 65.8122 9.4017 1.3549 0.2286
Residuals 150 1040.8855 6.9392


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 22.2 1.09   10 0.344 0.0491 20.4, 23.8 0.04
129S1/SvImJ m 26.6 1.2   10 0.379 0.0451 24.6, 27.7 0.12
A/J f 21.6 2.15   12 0.621 0.0995 16.9, 25.5 -0.02
A/J m 23.8 2.89   11 0.87 0.122 19.5, 28.1 -0.17
C57BL/6J f 20.0 1.33   11 0.401 0.0664 17.8, 22.0 -0.2
C57BL/6J m 25.5 2.32   10 0.732 0.0908 20.6, 29.4 0.01
CAST/EiJ f 14.0 1.29   10 0.407 0.0917 12.3, 15.9 -0.85
CAST/EiJ m 15.7 0.706   13 0.196 0.0449 14.7, 17.1 -1.0
NOD/ShiLtJ f 24.2 1.23   10 0.388 0.0508 22.2, 26.3 0.26
NOD/ShiLtJ m 28.9 2.05   9 0.683 0.0709 26.3, 32.7 0.36
NZO/HlLtJ f 42.5 6.69   9 2.23 0.157 33.6, 49.5 2.25
NZO/HlLtJ m 46.4 5.34   11 1.61 0.115 34.7, 54.3 2.17
PWK/PhJ f 15.2 1.16   11 0.351 0.0766 13.2, 16.6 -0.72
PWK/PhJ m 18.9 1.69   10 0.534 0.0893 17.0, 21.6 -0.67
WSB/EiJ f 14.9 2.37   8 0.839 0.16 11.0, 18.6 -0.75
WSB/EiJ m 17.4 1.67   11 0.503 0.096 14.0, 19.9 -0.83


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 22.191 0.833 23.837 20.545
129S1/SvImJ m 26.604 0.833 28.25 24.958
A/J f 21.6067 0.7604 23.1092 20.1041
A/J m 23.7545 0.7943 25.3239 22.1852
C57BL/6J f 20.0155 0.7943 21.5848 18.4461
C57BL/6J m 25.501 0.833 27.147 23.855
CAST/EiJ f 14.015 0.833 15.661 12.369
CAST/EiJ m 15.7254 0.7306 17.169 14.2818
NOD/ShiLtJ f 24.17 0.833 25.816 22.524
NOD/ShiLtJ m 28.9044 0.8781 30.6394 27.1694
NZO/HlLtJ f 42.5344 0.8781 44.2694 40.7994
NZO/HlLtJ m 46.3791 0.7943 47.9485 44.8097
PWK/PhJ f 15.1891 0.7943 16.7585 13.6197
PWK/PhJ m 18.9 0.833 20.546 17.254
WSB/EiJ f 14.8625 0.9313 16.7028 13.0222
WSB/EiJ m 17.3882 0.7943 18.9576 15.8188


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 24.3975 0.589 25.5614 23.2336
A/J both 22.6806 0.5498 23.767 21.5943
C57BL/6J both 22.7582 0.5755 23.8953 21.6211
CAST/EiJ both 14.8702 0.554 15.9649 13.7755
NOD/ShiLtJ both 26.5372 0.6052 27.733 25.3415
NZO/HlLtJ both 44.4568 0.592 45.6265 43.287
PWK/PhJ both 17.0445 0.5755 18.1817 15.9074
WSB/EiJ both 16.1253 0.612 17.3346 14.9161




  GWAS USING LINEAR MIXED MODELS