Project measure / variable:   GMC16   TG_17

ID, description, units MPD:56548   TG_17   triglyceride (plasma TG)   [mmol/L]  at age 16-17wks  
Data set, strains GMC16   inbred w/CC8   7 strains     sex: both     age: 16-17wks
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  STRAIN COMPARISON PLOT
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GMC16 - triglyceride (plasma TG) at age 16-17wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested6 strains7 strains
Mean of the strain means2.01   mmol/L 2.64   mmol/L
Median of the strain means1.77   mmol/L 2.50   mmol/L
SD of the strain means± 0.994 ± 1.44
Coefficient of variation (CV)0.494 0.547
Min–max range of strain means1.03   –   3.74   mmol/L 1.05   –   5.43   mmol/L
Mean sample size per strain3.3   mice 3.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 5.1429 5.1429 7.2462 0.0117
strain 4 34.9547 8.7387 12.3125 < 0.0001
sex:strain 4 16.5113 4.1278 5.816 0.0015
Residuals 29 20.5824 0.7097


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1.8 0.0921   4 0.046 0.0512 1.67, 1.89 -0.21
129S1/SvImJ m 1.73 0.249   4 0.125 0.144 1.43, 1.98 -0.63
A/J f 1.74 0.524   4 0.262 0.301 1.17, 2.42 -0.27
A/J m 2.5 0.311   4 0.156 0.125 2.06, 2.78 -0.09
C57BL/6J f 1.03 0.0692   4 0.0346 0.0673 0.939, 1.09 -0.99
C57BL/6J m 1.74 0.433   4 0.217 0.249 1.24, 2.19 -0.62
NOD/ShiLtJ f 3.74 2.35   3 1.35 0.627 2.24, 6.45 1.74
NOD/ShiLtJ m 2.64 0.443   4 0.221 0.167 2.19, 3.24 0.0
NZO/HlLtJ f 2.52 0.344   4 0.172 0.136 2.02, 2.76 0.51
NZO/HlLtJ m 5.43 1.5   4 0.748 0.276 4.11, 7.56 1.94
PWK/PhJ m 3.36 0.0   1   0.0 0.0 3.36, 3.36 0.5
WSB/EiJ f 1.23 0.0   1   0.0 0.0 1.23, 1.23 -0.78
WSB/EiJ m 1.05 0.114   3 0.066 0.109 0.949, 1.17 -1.1


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1.7995 0.4212 2.661 0.938
129S1/SvImJ m 1.7313 0.4212 2.5928 0.8697
A/J f 1.7407 0.4212 2.6023 0.8792
A/J m 2.4993 0.4212 3.3608 1.6377
C57BL/6J f 1.028 0.4212 1.8895 0.1665
C57BL/6J m 1.74 0.4212 2.6015 0.8785
NOD/ShiLtJ f 3.7407 0.4864 4.7355 2.7459
NOD/ShiLtJ m 2.644 0.4212 3.5055 1.7825
NZO/HlLtJ f 2.519 0.4212 3.3805 1.6575
NZO/HlLtJ m 5.4315 0.4212 6.293 4.57


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.7654 0.2979 2.3746 1.1562
A/J both 2.12 0.2979 2.7292 1.5108
C57BL/6J both 1.384 0.2979 1.9932 0.7748
NOD/ShiLtJ both 3.1923 0.3217 3.8503 2.5343
NZO/HlLtJ both 3.9752 0.2979 4.5844 3.3661




  GWAS USING LINEAR MIXED MODELS