Project measure / variable:   GMC09   breaks_XF_mean

ID, description, units MPD:55853   breaks_XF_mean   mean fine movement on X-axis, 21 h test, 15 min bins   [n]  
Data set, strains GMC09   inbred w/CC8   8 strains     sex: both     age: 12-13wks
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  STRAIN COMPARISON PLOT
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GMC09 - mean fine movement on X-axis, 21 h test, 15 min bins



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means179   n 154   n
Median of the strain means178   n 166   n
SD of the strain means± 81.1 ± 61.8
Coefficient of variation (CV)0.453 0.401
Min–max range of strain means73.2   –   306   n 57.1   –   235   n
Mean sample size per strain17.5   mice 16.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 56887.6232 56887.6232 3.3834 0.067
strain 7 1105777.0706 157968.1529 9.3952 < 0.0001
sex:strain 7 123397.3874 17628.1982 1.0484 0.3977
Residuals 255 4287512.1342 16813.7731


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 73.2 28.4   16 7.09 0.387 38.1, 165.0 -1.3
129S1/SvImJ m 57.1 16.9   16 4.23 0.296 26.5, 90.4 -1.57
A/J f 119.0 13.9   16 3.46 0.117 82.2, 135.0 -0.74
A/J m 119.0 14.0   16 3.51 0.118 86.6, 136.0 -0.57
C57BL/6J f 192.0 28.8   16 7.2 0.15 150.0, 260.0 0.16
C57BL/6J m 168.0 50.8   16 12.7 0.302 107.0, 317.0 0.22
CAST/EiJ f 271.0 232.0   19 53.2 0.855 133.0, 1198.0 1.14
CAST/EiJ m 217.0 49.3   14 13.2 0.228 157.0, 331.0 1.02
NOD/ShiLtJ f 306.0 212.0   18 50.0 0.693 157.0, 802.0 1.57
NOD/ShiLtJ m 186.0 51.8   16 12.9 0.278 140.0, 356.0 0.51
NZO/HlLtJ f 103.0 30.7   17 7.45 0.299 53.6, 176.0 -0.94
NZO/HlLtJ m 88.3 12.5   17 3.02 0.141 71.1, 117.0 -1.07
PWK/PhJ f 165.0 25.8   20 5.77 0.156 113.0, 224.0 -0.17
PWK/PhJ m 163.0 34.9   20 7.81 0.214 112.0, 241.0 0.14
WSB/EiJ f 202.0 77.0   18 18.1 0.38 119.0, 402.0 0.28
WSB/EiJ m 235.0 388.0   16 96.9 1.65 104.0, 1681.0 1.31


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 73.2 32.417 137.0391 9.3609
129S1/SvImJ m 57.0625 32.417 120.9016 -6.7766
A/J f 118.5125 32.417 182.3516 54.6734
A/J m 118.7812 32.417 182.6204 54.9421
C57BL/6J f 191.7062 32.417 255.5454 127.8671
C57BL/6J m 168.3 32.417 232.1391 104.4609
CAST/EiJ f 271.0789 29.7479 329.6617 212.4962
CAST/EiJ m 216.6786 34.6552 284.9254 148.4317
NOD/ShiLtJ f 306.1167 30.563 366.3048 245.9286
NOD/ShiLtJ m 186.35 32.417 250.1891 122.5109
NZO/HlLtJ f 102.6176 31.4491 164.5507 40.6846
NZO/HlLtJ m 88.3471 31.4491 150.2801 26.414
PWK/PhJ f 165.425 28.9946 222.5244 108.3256
PWK/PhJ m 163.285 28.9946 220.3844 106.1856
WSB/EiJ f 202.2889 30.563 262.477 142.1008
WSB/EiJ m 235.2375 32.417 299.0766 171.3984


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 65.1312 22.9223 110.2723 19.9902
A/J both 118.6469 22.9223 163.7879 73.5058
C57BL/6J both 180.0031 22.9223 225.1442 134.8621
CAST/EiJ both 243.8788 22.8359 288.8498 198.9077
NOD/ShiLtJ both 246.2333 22.2764 290.1026 202.3641
NZO/HlLtJ both 95.4824 22.2379 139.2756 51.6891
PWK/PhJ both 164.355 20.5023 204.7304 123.9796
WSB/EiJ both 218.7632 22.2764 262.6324 174.894




  GWAS USING LINEAR MIXED MODELS