Project measure / variable:   GMC01   center_time_3

ID, description, units MPD:55063   center_time_3   center time, successive 5 min intervals   [%]  3rd 5min  
Data set, strains GMC01   inbred w/CC8   8 strains     sex: both     age: 8-9wks
Procedure open field test
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

GMC01 - center time, successive 5 min intervals 3rd 5min



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means12.1   % 12.4   %
Median of the strain means12.8   % 13.6   %
SD of the strain means± 11.0 ± 9.69
Coefficient of variation (CV)0.909 0.783
Min–max range of strain means0.0500   –   34.6   % 0.0938   –   26.9   %
Mean sample size per strain17.5   mice 16.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0028 0.0028 0.0001 0.9942
strain 7 24088.2594 3441.1799 63.3465 < 0.0001
sex:strain 7 883.7913 126.2559 2.3242 0.0258
Residuals 259 14069.6936 54.3231


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1.51 2.67   16 0.668 1.77 -0.96
129S1/SvImJ m 0.713 1.16   15 0.299 1.62 -1.2
A/J f 0.05 0.2   16 0.05 4.0 -1.1
A/J m 0.0938 0.304   16 0.0761 3.25 -1.27
C57BL/6J f 15.7 7.39   16 1.85 0.471 5.0, 26.4 0.33
C57BL/6J m 21.6 6.65   16 1.66 0.308 11.1, 34.6 0.95
CAST/EiJ f 14.0 4.99   19 1.14 0.356 7.2, 25.9 0.18
CAST/EiJ m 16.7 7.24   18 1.71 0.435 7.5, 38.3 0.45
NOD/ShiLtJ f 34.6 14.3   18 3.37 0.413 19.5, 71.8 2.06
NOD/ShiLtJ m 26.9 7.9   16 1.97 0.294 14.3, 43.1 1.5
NZO/HlLtJ f 4.66 6.09   17 1.48 1.31 -0.67
NZO/HlLtJ m 5.85 10.3   17 2.49 1.76 -0.67
PWK/PhJ f 11.7 3.81   20 0.852 0.325 7.1, 20.9 -0.03
PWK/PhJ m 11.3 5.85   22 1.25 0.517 3.4, 28.8 -0.11
WSB/EiJ f 14.2 5.49   18 1.29 0.386 6.8, 27.6 0.2
WSB/EiJ m 15.9 14.4   15 3.72 0.909 3.4, 55.0 0.36


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1.5125 1.8426 5.1409 -2.1159
129S1/SvImJ m 0.7133 1.903 4.4607 -3.0341
A/J f 0.05 1.8426 3.6784 -3.5784
A/J m 0.0937 1.8426 3.7221 -3.5346
C57BL/6J f 15.6813 1.8426 19.3096 12.0529
C57BL/6J m 21.5688 1.8426 25.1971 17.9404
CAST/EiJ f 14.0158 1.6909 17.3454 10.6861
CAST/EiJ m 16.6667 1.7372 20.0876 13.2458
NOD/ShiLtJ f 34.6222 1.7372 38.0431 31.2013
NOD/ShiLtJ m 26.8938 1.8426 30.5221 23.2654
NZO/HlLtJ f 4.6647 1.7876 8.1848 1.1446
NZO/HlLtJ m 5.8529 1.7876 9.373 2.3329
PWK/PhJ f 11.735 1.6481 14.9803 8.4897
PWK/PhJ m 11.3182 1.5714 14.4125 8.2239
WSB/EiJ f 14.2056 1.7372 17.6264 10.7847
WSB/EiJ m 15.86 1.903 19.6074 12.1126


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.1129 1.3245 3.721 -1.4952
A/J both 0.0719 1.3029 2.6375 -2.4938
C57BL/6J both 18.625 1.3029 21.1907 16.0593
CAST/EiJ both 15.3412 1.2121 17.7281 12.9543
NOD/ShiLtJ both 30.758 1.2662 33.2514 28.2646
NZO/HlLtJ both 5.2588 1.264 7.7479 2.7698
PWK/PhJ both 11.5266 1.1386 13.7686 9.2846
WSB/EiJ both 15.0328 1.2884 17.5698 12.4958




  GWAS USING LINEAR MIXED MODELS