Project measure / variable:   GMC01   rears_2

ID, description, units MPD:55022   rears_2   number of rears, successive 5 min intervals   [n]  2nd 5min  
Data set, strains GMC01   inbred w/CC8   8 strains     sex: both     age: 8-9wks
Procedure open field test
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

GMC01 - number of rears, successive 5 min intervals 2nd 5min



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means24.9   n 25.2   n
Median of the strain means27.5   n 28.1   n
SD of the strain means± 16.7 ± 16.7
Coefficient of variation (CV)0.671 0.662
Min–max range of strain means0.188   –   42.8   n 0.125   –   41.1   n
Mean sample size per strain17.5   mice 16.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 6.6748 6.6748 0.0692 0.7927
strain 7 64865.2654 9266.4665 96.0501 < 0.0001
sex:strain 7 591.6537 84.522 0.8761 0.5259
Residuals 259 24987.1116 96.4753


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 2.25 3.49   16 0.873 1.55 -1.36
129S1/SvImJ m 4.87 4.98   15 1.29 1.02 -1.22
A/J f 0.188 0.544   16 0.136 2.9 -1.48
A/J m 0.125 0.342   16 0.0854 2.73 -1.5
C57BL/6J f 33.8 11.9   16 2.98 0.353 9.0, 58.0 0.53
C57BL/6J m 40.6 8.48   16 2.12 0.209 29.0, 55.0 0.93
CAST/EiJ f 39.3 12.1   19 2.78 0.308 20.0, 61.0 0.86
CAST/EiJ m 36.3 9.43   18 2.22 0.26 21.0, 58.0 0.67
NOD/ShiLtJ f 42.8 11.6   18 2.74 0.272 21.0, 64.0 1.07
NOD/ShiLtJ m 41.1 6.66   16 1.67 0.162 27.0, 53.0 0.96
NZO/HlLtJ f 20.8 10.3   17 2.49 0.494 8.0, 41.0 -0.25
NZO/HlLtJ m 18.5 7.48   17 1.81 0.405 9.0, 31.0 -0.4
PWK/PhJ f 39.1 11.5   20 2.56 0.293 13.0, 53.0 0.85
PWK/PhJ m 39.9 11.1   22 2.36 0.278 15.0, 65.0 0.88
WSB/EiJ f 21.3 15.5   18 3.66 0.73 3.0, 50.0 -0.22
WSB/EiJ m 20.0 13.1   15 3.37 0.653 -0.31


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 2.25 2.4555 7.0854 -2.5854
129S1/SvImJ m 4.8667 2.5361 9.8606 -0.1273
A/J f 0.1875 2.4555 5.0229 -4.6479
A/J m 0.125 2.4555 4.9604 -4.7104
C57BL/6J f 33.75 2.4555 38.5854 28.9146
C57BL/6J m 40.5625 2.4555 45.3979 35.7271
CAST/EiJ f 39.2632 2.2534 43.7004 34.8259
CAST/EiJ m 36.3333 2.3151 40.8922 31.7745
NOD/ShiLtJ f 42.7778 2.3151 47.3366 38.2189
NOD/ShiLtJ m 41.125 2.4555 45.9604 36.2896
NZO/HlLtJ f 20.8235 2.3822 25.5145 16.1325
NZO/HlLtJ m 18.4706 2.3822 23.1616 13.7796
PWK/PhJ f 39.1 2.1963 43.4249 34.7751
PWK/PhJ m 39.8636 2.0941 43.9873 35.74
WSB/EiJ f 21.2778 2.3151 25.8366 16.7189
WSB/EiJ m 20.0 2.5361 24.994 15.006


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 3.5583 1.765 7.034 0.0827
A/J both 0.1562 1.7363 3.5754 -3.2629
C57BL/6J both 37.1563 1.7363 40.5754 33.7371
CAST/EiJ both 37.7982 1.6153 40.9791 34.6174
NOD/ShiLtJ both 41.9514 1.6874 45.2742 38.6286
NZO/HlLtJ both 19.6471 1.6845 22.9641 16.33
PWK/PhJ both 39.4818 1.5173 42.4697 36.494
WSB/EiJ both 20.6389 1.7169 24.0198 17.258




  GWAS USING LINEAR MIXED MODELS