Project measure / variable:   GMC01   distance_total

ID, description, units MPD:55015   distance_total   distance traveled total, 20 min test   [cm]  
Data set, strains GMC01   inbred w/CC8   8 strains     sex: both     age: 8-9wks
Procedure open field test
Ontology mappings

  STRAIN COMPARISON PLOT
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GMC01 - distance traveled total, 20 min test



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means17289   cm 16320   cm
Median of the strain means14512   cm 13852   cm
SD of the strain means± 12216 ± 11232
Coefficient of variation (CV)0.707 0.688
Min–max range of strain means2829   –   38823   cm 4440   –   36420   cm
Mean sample size per strain17.5   mice 16.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 128386088.6895 128386088.6895 6.69 0.0102
strain 7 31970288803.7581 4567184114.8226 237.9875 < 0.0001
sex:strain 7 135180159.2445 19311451.3206 1.0063 0.4271
Residuals 259 4970431685.4642 19190855.9284


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 8386.0 9365.0   16 2341.0 1.12 1745.0, 42002.0 -0.73
129S1/SvImJ m 7690.0 1675.0   15 432.0 0.218 4297.0, 10512.0 -0.77
A/J f 2829.0 1356.0   16 339.0 0.479 1061.0, 5179.0 -1.18
A/J m 4440.0 3765.0   16 941.0 0.848 2211.0, 17995.0 -1.06
C57BL/6J f 28171.0 4100.0   16 1025.0 0.146 19824.0, 34454.0 0.89
C57BL/6J m 27637.0 5038.0   16 1260.0 0.182 21377.0, 41854.0 1.01
CAST/EiJ f 15258.0 2578.0   19 591.0 0.169 10978.0, 20613.0 -0.17
CAST/EiJ m 14542.0 2474.0   18 583.0 0.17 12174.0, 19980.0 -0.16
NOD/ShiLtJ f 38823.0 7939.0   18 1871.0 0.205 24578.0, 53835.0 1.76
NOD/ShiLtJ m 36420.0 5396.0   16 1349.0 0.148 25725.0, 45701.0 1.79
NZO/HlLtJ f 6839.0 2381.0   17 577.0 0.348 4383.0, 12833.0 -0.86
NZO/HlLtJ m 6106.0 2017.0   17 489.0 0.33 3619.0, 11518.0 -0.91
PWK/PhJ f 13766.0 2630.0   20 588.0 0.191 10250.0, 20759.0 -0.29
PWK/PhJ m 13163.0 2517.0   22 537.0 0.191 8568.0, 19565.0 -0.28
WSB/EiJ f 24241.0 4709.0   18 1110.0 0.194 15221.0, 32197.0 0.57
WSB/EiJ m 20564.0 3905.0   15 1008.0 0.19 14560.0, 28465.0 0.38


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 8386.2687 1095.1842 10542.8678 6229.6697
129S1/SvImJ m 7689.8667 1131.1014 9917.1926 5462.5407
A/J f 2829.1812 1095.1842 4985.7803 672.5822
A/J m 4439.5375 1095.1842 6596.1366 2282.9384
C57BL/6J f 28170.9063 1095.1842 30327.5053 26014.3072
C57BL/6J m 27637.1062 1095.1842 29793.7053 25480.5072
CAST/EiJ f 15257.9895 1005.01 17237.0205 13278.9584
CAST/EiJ m 14541.8167 1032.5496 16575.0778 12508.5556
NOD/ShiLtJ f 38822.6722 1032.5496 40855.9333 36789.4111
NOD/ShiLtJ m 36420.0062 1095.1842 38576.6053 34263.4072
NZO/HlLtJ f 6839.2882 1062.4848 8931.4966 4747.0798
NZO/HlLtJ m 6106.3588 1062.4848 8198.5672 4014.1504
PWK/PhJ f 13765.53 979.5626 15694.4508 11836.6092
PWK/PhJ m 13163.0591 933.9762 15002.213 11323.9052
WSB/EiJ f 24240.8056 1032.5496 26274.0666 22207.5445
WSB/EiJ m 20564.18 1131.1014 22791.5059 18336.8541


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 8038.0677 787.2133 9588.221 6487.9145
A/J both 3634.3594 774.4122 5159.3052 2109.4136
C57BL/6J both 27904.0063 774.4122 29428.9521 26379.0604
CAST/EiJ both 14899.9031 720.4519 16318.5921 13481.214
NOD/ShiLtJ both 37621.3392 752.5934 39103.3202 36139.3583
NZO/HlLtJ both 6472.8235 751.2902 7952.2383 4993.4088
PWK/PhJ both 13464.2945 676.7301 14796.8881 12131.701
WSB/EiJ both 22402.4928 765.7593 23910.3996 20894.586




GWAS analysis not available: At least 12 strains are required