Project measure / variable:   Loos2   long_shelter_dur_LT

ID, description, units MPD:54074   long_shelter_dur_LT   cumulative duration of long shelter visits (sheltering), over 3 days of testing   [s]  during light phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
Ontology mappings

  STRAIN COMPARISON PLOT
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Loos2 - cumulative duration of long shelter visits (sheltering), over 3 days of testing during light phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means36546   s
Median of the strain means37171   s
SD of the strain means± 2986
Coefficient of variation (CV)0.0817
Min–max range of strain means30294   –   40023   s
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 2355474708.0931 235547470.8093 20.5682 < 0.0001
Residuals 426 4878555949.8303 11452009.2719


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 38071.0 4811.0   59 626.0 0.126 19468.0, 42232.0 0.51
A/J m 39559.0 2932.0   43 447.0 0.0741 27128.0, 43200.0 1.01
BALB/cByJ m 37397.0 2671.0   44 403.0 0.0714 31192.0, 41146.0 0.28
C3H/HeJ m 36153.0 3925.0   29 729.0 0.109 23767.0, 40744.0 -0.13
C57BL/6J m 36985.0 2832.0   107 274.0 0.0766 22839.0, 41396.0 0.15
CAST/EiJ m 30294.0 2512.0   14 671.0 0.0829 25343.0, 33217.0 -2.09
DBA/2J m 40023.0 2855.0   39 457.0 0.0713 32061.0, 43097.0 1.16
FVB/NJ m 31912.0 3165.0   36 527.0 0.0992 24103.0, 36630.0 -1.55
NOD/ShiLtJ m 36053.0 3728.0   37 613.0 0.103 27398.0, 41152.0 -0.17
PWK/PhJ m 37171.0 3351.0   15 865.0 0.0901 27654.0, 41019.0 0.21
WSB/EiJ m 38393.0 3792.0   14 1014.0 0.0988 27686.0, 42702.0 0.62


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 38071.0441 440.5699 38937.0055 37205.0826
A/J m 39558.6 516.0676 40572.9558 38544.2442
BALB/cByJ m 37397.4455 510.1695 38400.2083 36394.6826
C3H/HeJ m 36152.8276 628.4082 37387.9943 34917.6609
C57BL/6J m 36984.7411 327.1515 37627.7733 36341.709
CAST/EiJ m 30294.2429 904.4339 32071.9513 28516.5344
DBA/2J m 40023.3692 541.8868 41088.4738 38958.2646
FVB/NJ m 31912.4056 564.0136 33021.0016 30803.8095
NOD/ShiLtJ m 36052.8054 556.3396 37146.3178 34959.293
PWK/PhJ m 37170.6733 873.7661 38888.1029 35453.2438
WSB/EiJ m 38393.0429 904.4339 40170.7513 36615.3344




  GWAS USING LINEAR MIXED MODELS