Project measure / variable:   Loos2   spout_anticipation_LT

ID, description, units MPD:54027   spout_anticipation_LT   change in Spout zone duration: anticipation of phase change, over 3 days of testing    during light phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - change in Spout zone duration: anticipation of phase change, over 3 days of testing during light phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means-0.00216   None
Median of the strain means-0.00277   None
SD of the strain means± 0.00803
Coefficient of variation (CV)-3.73
Min–max range of strain means-0.0122   –   0.0151   None
Mean sample size per strain33.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 0.018 0.0018 0.8245 0.6052
Residuals 408 0.8905 0.0022


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m -0.00277 0.0386   58 0.00507 -13.9 -0.084, 0.136 -0.08
A/J m -0.00636 0.0255   42 0.00394 -4.01 -0.07, 0.0469 -0.52
BALB/cByJ m -0.0044 0.0284   40 0.0045 -6.47 -0.0876, 0.0553 -0.28
C3H/HeJ m 0.000387 0.0313   25 0.00627 81.1 -0.0586, 0.066 0.32
C57BL/6J m 0.000246 0.0527   107 0.0051 215.0 -0.117, 0.227 0.3
CAST/EiJ m 0.00395 0.0343   14 0.00917 8.68 -0.0446, 0.093 0.76
DBA/2J m 0.00338 0.027   39 0.00433 8.0 -0.05, 0.0887 0.69
FVB/NJ m -0.00925 0.0532   29 0.00987 -5.75 -0.116, 0.117 -0.88
NOD/ShiLtJ m 0.0151 0.084   36 0.014 5.55 -0.057, 0.474 2.15
PWK/PhJ m -0.0122 0.0552   15 0.0143 -4.53 -0.158, 0.0514 -1.25
WSB/EiJ m -0.0118 0.0363   14 0.0097 -3.09 -0.0949, 0.047 -1.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m -0.0028 0.0061 0.0093 -0.0148
A/J m -0.0064 0.0072 0.0078 -0.0205
BALB/cByJ m -0.0044 0.0074 0.0101 -0.0189
C3H/HeJ m 0.0004 0.0093 0.0188 -0.018
C57BL/6J m 0.0002 0.0045 0.0091 -0.0086
CAST/EiJ m 0.004 0.0125 0.0285 -0.0206
DBA/2J m 0.0034 0.0075 0.0181 -0.0113
FVB/NJ m -0.0092 0.0087 0.0078 -0.0263
NOD/ShiLtJ m 0.0151 0.0078 0.0304 -0.0002
PWK/PhJ m -0.0122 0.0121 0.0115 -0.0359
WSB/EiJ m -0.0118 0.0125 0.0128 -0.0363




  GWAS USING LINEAR MIXED MODELS