Project measure / variable:   Loos2   spout_dur_DK

ID, description, units MPD:54012   spout_dur_DK   cumulative duration in spout zone, over 3 days of testing, log10 transformed   [log(s)]  during dark phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - cumulative duration in spout zone, over 3 days of testing, log10 transformed during dark phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means3.11   log(s)
Median of the strain means3.14   log(s)
SD of the strain means± 0.178
Coefficient of variation (CV)0.0572
Min–max range of strain means2.87   –   3.46   log(s)
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 10.0463 1.0046 29.7969 < 0.0001
Residuals 426 14.363 0.0337


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 2.92 0.226   59 0.0295 0.0775 2.2, 3.28 -1.05
A/J m 3.23 0.162   43 0.0247 0.0502 2.92, 3.61 0.69
BALB/cByJ m 3.14 0.146   44 0.022 0.0464 2.63, 3.44 0.18
C3H/HeJ m 2.87 0.163   29 0.0303 0.0568 2.6, 3.53 -1.33
C57BL/6J m 3.23 0.162   107 0.0157 0.0503 2.75, 3.52 0.69
CAST/EiJ m 3.16 0.113   14 0.0301 0.0356 3.0, 3.37 0.3
DBA/2J m 3.07 0.183   39 0.0294 0.0597 2.76, 3.64 -0.21
FVB/NJ m 2.87 0.169   36 0.0281 0.0588 2.58, 3.21 -1.33
NOD/ShiLtJ m 3.05 0.188   37 0.0309 0.0617 2.69, 3.79 -0.32
PWK/PhJ m 3.46 0.334   15 0.0862 0.0964 3.02, 3.95 1.98
WSB/EiJ m 3.18 0.207   14 0.0554 0.0651 2.9, 3.64 0.41


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 2.9204 0.0239 2.9674 2.8734
A/J m 3.2266 0.028 3.2816 3.1715
BALB/cByJ m 3.1364 0.0277 3.1908 3.082
C3H/HeJ m 2.8732 0.0341 2.9403 2.8062
C57BL/6J m 3.2274 0.0178 3.2623 3.1925
CAST/EiJ m 3.1642 0.0491 3.2607 3.0678
DBA/2J m 3.0702 0.0294 3.128 3.0124
FVB/NJ m 2.8717 0.0306 2.9319 2.8116
NOD/ShiLtJ m 3.0468 0.0302 3.1061 2.9874
PWK/PhJ m 3.4649 0.0474 3.5581 3.3717
WSB/EiJ m 3.1835 0.0491 3.28 3.087




  GWAS USING LINEAR MIXED MODELS