Project measure / variable:   Odet2   sperm_LIN_90

ID, description, units MPD:53897   sperm_LIN_90   sperm mean linearity   [ratio]  at 90 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - sperm mean linearity at 90 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means28.0   ratio
Median of the strain means28.4   ratio
SD of the strain means± 3.89
Coefficient of variation (CV)0.139
Min–max range of strain means20.7   –   32.7   ratio
Mean sample size per strain13.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 1235.8769 176.5538 6.3887 < 0.0001
Residuals 97 2680.6374 27.6354


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 27.4 4.47   16 1.12 0.163 21.0, 36.0 -0.17
A/J m 32.7 5.15   14 1.38 0.157 26.0, 43.0 1.2
C57BL/6J m 26.2 5.12   11 1.54 0.195 18.0, 36.0 -0.48
CAST/EiJ m 30.2 3.6   12 1.04 0.119 26.0, 37.0 0.55
NOD/ShiLtJ m 20.7 4.99   10 1.58 0.241 16.0, 30.0 -1.89
NZO/HlLtJ m 29.3 4.1   15 1.06 0.14 23.0, 37.0 0.32
PWK/PhJ m 25.9 7.45   13 2.07 0.288 16.0, 37.0 -0.55
WSB/EiJ m 32.0 6.24   14 1.67 0.195 21.0, 38.0 1.02


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 27.4375 1.3142 30.0459 24.8291
A/J m 32.7143 1.405 35.5028 29.9258
C57BL/6J m 26.1818 1.585 29.3277 23.036
CAST/EiJ m 30.25 1.5175 33.2619 27.2381
NOD/ShiLtJ m 20.7 1.6624 23.9994 17.4006
NZO/HlLtJ m 29.2667 1.3573 31.9606 26.5727
PWK/PhJ m 25.9231 1.458 28.8168 23.0293
WSB/EiJ m 32.0 1.405 34.7885 29.2115




  GWAS USING LINEAR MIXED MODELS