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Project measure / variable:   Odet2   sperm_LIN_60

ID, description, units MPD:53896   sperm_LIN_60   sperm mean linearity   [ratio]  at 60 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - sperm mean linearity at 60 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means31.3   ratio
Median of the strain means31.5   ratio
SD of the strain means± 3.42
Coefficient of variation (CV)0.109
Min–max range of strain means25.2   –   35.0   ratio
Mean sample size per strain12.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 942.9448 134.7064 5.6665 < 0.0001
Residuals 92 2187.0552 23.7723


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 28.4 3.95   17 0.958 0.139 21.0, 36.0 -0.85
A/J m 35.0 4.88   13 1.35 0.139 27.0, 42.0 1.08
C57BL/6J m 30.2 3.63   11 1.09 0.12 24.0, 37.0 -0.33
CAST/EiJ m 34.3 3.94   12 1.14 0.115 30.0, 44.0 0.87
NOD/ShiLtJ m 25.2 5.74   9 1.91 0.228 18.0, 39.0 -1.79
NZO/HlLtJ m 32.8 4.49   10 1.42 0.137 28.0, 41.0 0.44
PWK/PhJ m 30.3 7.16   14 1.91 0.236 20.0, 43.0 -0.3
WSB/EiJ m 34.3 4.27   14 1.14 0.124 28.0, 42.0 0.87


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 28.3529 1.1825 30.7015 26.0043
A/J m 35.0 1.3523 37.6857 32.3143
C57BL/6J m 30.1818 1.4701 33.1015 27.2621
CAST/EiJ m 34.3333 1.4075 37.1287 31.5379
NOD/ShiLtJ m 25.2222 1.6252 28.4501 21.9944
NZO/HlLtJ m 32.8 1.5418 35.8622 29.7378
PWK/PhJ m 30.2857 1.3031 32.8737 27.6977
WSB/EiJ m 34.2857 1.3031 36.8737 31.6977




  GWAS USING LINEAR MIXED MODELS