Project measure / variable:   Odet2   sperm_BCF_120

ID, description, units MPD:53885   sperm_BCF_120   sperm mean cross beat frequency   [Hz]  at 120 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - sperm mean cross beat frequency at 120 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means32.3   Hz
Median of the strain means32.2   Hz
SD of the strain means± 2.32
Coefficient of variation (CV)0.0718
Min–max range of strain means28.8   –   36.8   Hz
Mean sample size per strain12.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 492.1505 70.3072 20.1218 < 0.0001
Residuals 95 331.9386 3.4941


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 30.9 1.69   17 0.41 0.0548 28.7, 33.9 -0.61
A/J m 31.3 1.74   14 0.466 0.0557 28.6, 35.0 -0.44
C57BL/6J m 32.7 2.38   11 0.718 0.0729 30.3, 38.3 0.16
CAST/EiJ m 36.8 2.15   12 0.621 0.0584 33.8, 40.7 1.93
NOD/ShiLtJ m 33.4 1.17   10 0.369 0.0349 31.9, 35.5 0.46
NZO/HlLtJ m 33.0 1.76   10 0.558 0.0535 28.8, 35.2 0.29
PWK/PhJ m 31.7 2.32   15 0.598 0.0732 28.8, 36.3 -0.27
WSB/EiJ m 28.8 1.35   14 0.36 0.0468 27.0, 30.9 -1.52


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 30.8824 0.4534 31.7824 29.9823
A/J m 31.3 0.4996 32.2918 30.3082
C57BL/6J m 32.6909 0.5636 33.8098 31.572
CAST/EiJ m 36.8417 0.5396 37.9129 35.7704
NOD/ShiLtJ m 33.42 0.5911 34.5935 32.2465
NZO/HlLtJ m 32.98 0.5911 34.1535 31.8065
PWK/PhJ m 31.6733 0.4826 32.6315 30.7152
WSB/EiJ m 28.7571 0.4996 29.7489 27.7654




  GWAS USING LINEAR MIXED MODELS