Project measure / variable:   Odet2   sperm_BCF_60

ID, description, units MPD:53883   sperm_BCF_60   sperm mean cross beat frequency   [Hz]  at 60 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - sperm mean cross beat frequency at 60 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means30.2   Hz
Median of the strain means29.8   Hz
SD of the strain means± 1.47
Coefficient of variation (CV)0.0487
Min–max range of strain means28.5   –   32.4   Hz
Mean sample size per strain12.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 182.0657 26.0094 4.5293 0.0002
Residuals 92 528.3043 5.7424


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 29.7 3.01   17 0.73 0.101 23.7, 36.4 -0.36
A/J m 29.8 2.33   13 0.645 0.0782 26.4, 33.7 -0.29
C57BL/6J m 31.3 2.46   11 0.74 0.0784 28.2, 36.4 0.73
CAST/EiJ m 32.4 2.45   12 0.706 0.0755 28.2, 36.4 1.48
NOD/ShiLtJ m 31.9 1.48   9 0.493 0.0464 29.9, 34.8 1.14
NZO/HlLtJ m 29.6 2.5   10 0.789 0.0842 25.9, 33.2 -0.42
PWK/PhJ m 28.6 2.23   14 0.597 0.0781 25.1, 31.7 -1.1
WSB/EiJ m 28.5 2.04   14 0.544 0.0714 25.2, 31.3 -1.17


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 29.7471 0.5812 30.9014 28.5928
A/J m 29.7769 0.6646 31.0969 28.4569
C57BL/6J m 31.3364 0.7225 32.7714 29.9014
CAST/EiJ m 32.4167 0.6918 33.7906 31.0428
NOD/ShiLtJ m 31.8667 0.7988 33.4531 30.2802
NZO/HlLtJ m 29.62 0.7578 31.125 28.115
PWK/PhJ m 28.5857 0.6404 29.8577 27.3137
WSB/EiJ m 28.5214 0.6404 29.7934 27.2494




  GWAS USING LINEAR MIXED MODELS