Project measure / variable:   Odet2   sperm_BCF_30

ID, description, units MPD:53882   sperm_BCF_30   sperm mean cross beat frequency   [Hz]  at 30 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - sperm mean cross beat frequency at 30 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means28.6   Hz
Median of the strain means28.9   Hz
SD of the strain means± 1.53
Coefficient of variation (CV)0.0535
Min–max range of strain means25.4   –   30.6   Hz
Mean sample size per strain13.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 235.9371 33.7053 2.9051 0.0084
Residuals 97 1125.4168 11.6022


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 28.4 4.89   15 1.26 0.172 21.1, 38.2 -0.15
A/J m 29.9 5.01   16 1.25 0.168 24.6, 46.9 0.83
C57BL/6J m 28.9 3.21   11 0.969 0.111 23.5, 34.5 0.18
CAST/EiJ m 30.6 1.67   12 0.482 0.0545 28.1, 33.8 1.29
NOD/ShiLtJ m 28.1 2.53   10 0.799 0.0899 24.3, 31.2 -0.34
NZO/HlLtJ m 28.8 2.26   12 0.651 0.0784 25.7, 31.6 0.11
PWK/PhJ m 25.4 2.01   15 0.518 0.0791 21.5, 29.3 -2.1
WSB/EiJ m 28.9 2.92   14 0.78 0.101 24.1, 32.9 0.18


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 28.42 0.8795 30.1655 26.6745
A/J m 29.8938 0.8516 31.5838 28.2037
C57BL/6J m 28.9273 1.027 30.9656 26.8889
CAST/EiJ m 30.6083 0.9833 32.5599 28.6568
NOD/ShiLtJ m 28.11 1.0771 30.2478 25.9722
NZO/HlLtJ m 28.775 0.9833 30.7266 26.8234
PWK/PhJ m 25.3867 0.8795 27.1322 23.6411
WSB/EiJ m 28.9214 0.9103 30.7282 27.1146




  GWAS USING LINEAR MIXED MODELS