Project measure / variable:   Odet2   sperm_BCF_10

ID, description, units MPD:53881   sperm_BCF_10   sperm mean cross beat frequency   [Hz]  at 10 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - sperm mean cross beat frequency at 10 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means30.5   Hz
Median of the strain means30.5   Hz
SD of the strain means± 1.88
Coefficient of variation (CV)0.0618
Min–max range of strain means27.2   –   32.8   Hz
Mean sample size per strain14.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 345.6445 49.3778 3.5629 0.0017
Residuals 108 1496.7627 13.8589


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 31.4 3.44   17 0.834 0.109 25.8, 36.2 0.5
A/J m 30.6 4.11   17 0.998 0.135 24.4, 38.9 0.07
C57BL/6J m 32.8 2.43   11 0.732 0.074 29.7, 38.2 1.24
CAST/EiJ m 28.7 1.65   12 0.477 0.0575 26.8, 32.1 -0.94
NOD/ShiLtJ m 30.1 3.9   10 1.23 0.129 24.4, 37.7 -0.19
NZO/HlLtJ m 32.6 3.02   16 0.754 0.0926 28.1, 37.7 1.13
PWK/PhJ m 27.2 3.12   15 0.805 0.115 21.2, 32.7 -1.73
WSB/EiJ m 30.3 5.63   18 1.33 0.186 22.0, 48.0 -0.09


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 31.4353 0.9029 33.225 29.6456
A/J m 30.5706 0.9029 32.3603 28.7809
C57BL/6J m 32.7909 1.1225 35.0158 30.566
CAST/EiJ m 28.7167 1.0747 30.8468 26.5865
NOD/ShiLtJ m 30.11 1.1772 32.4435 27.7765
NZO/HlLtJ m 32.5812 0.9307 34.426 30.7365
PWK/PhJ m 27.2 0.9612 29.1053 25.2947
WSB/EiJ m 30.3056 0.8775 32.0448 28.5663




  GWAS USING LINEAR MIXED MODELS