Project measure / variable:   Odet2   sperm_VCL_30

ID, description, units MPD:53869   sperm_VCL_30   sperm mean curvilinear velocity   [µm/s]  at 30 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - sperm mean curvilinear velocity at 30 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means213   µm/s
Median of the strain means201   µm/s
SD of the strain means± 38.9
Coefficient of variation (CV)0.183
Min–max range of strain means160   –   281   µm/s
Mean sample size per strain13.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 146781.6096 20968.8014 18.5802 < 0.0001
Residuals 97 109470.2247 1128.559


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 196.0 24.5   15 6.32 0.125 151.0, 238.0 -0.44
A/J m 194.0 35.4   16 8.85 0.183 82.6, 237.0 -0.49
C57BL/6J m 197.0 46.4   11 14.0 0.236 108.0, 258.0 -0.42
CAST/EiJ m 160.0 15.5   12 4.48 0.0969 134.0, 186.0 -1.37
NOD/ShiLtJ m 213.0 45.0   10 14.2 0.211 134.0, 280.0 -0.01
NZO/HlLtJ m 205.0 22.0   12 6.35 0.108 172.0, 242.0 -0.21
PWK/PhJ m 281.0 47.8   15 12.3 0.17 215.0, 376.0 1.74
WSB/EiJ m 260.0 14.1   14 3.77 0.0543 243.0, 290.0 1.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 195.88 8.6739 213.0954 178.6646
A/J m 193.6437 8.3985 210.3125 176.975
C57BL/6J m 196.9273 10.129 217.0305 176.824
CAST/EiJ m 160.2083 9.6978 179.4557 140.961
NOD/ShiLtJ m 212.81 10.6234 233.8944 191.7256
NZO/HlLtJ m 204.5083 9.6978 223.7557 185.261
PWK/PhJ m 280.7 8.6739 297.9154 263.4846
WSB/EiJ m 259.9357 8.9784 277.7553 242.1161




  GWAS USING LINEAR MIXED MODELS