Project measure / variable:   Odet2   sperm_VCL_10

ID, description, units MPD:53868   sperm_VCL_10   sperm mean curvilinear velocity   [µm/s]  at 10 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - sperm mean curvilinear velocity at 10 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means237   µm/s
Median of the strain means221   µm/s
SD of the strain means± 57.2
Coefficient of variation (CV)0.242
Min–max range of strain means172   –   346   µm/s
Mean sample size per strain14.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 330800.6636 47257.2377 31.7005 < 0.0001
Residuals 108 161000.0836 1490.7415


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 207.0 22.7   17 5.51 0.11 154.0, 238.0 -0.52
A/J m 228.0 42.4   17 10.3 0.186 114.0, 272.0 -0.15
C57BL/6J m 172.0 20.2   11 6.09 0.118 129.0, 196.0 -1.13
CAST/EiJ m 191.0 23.3   12 6.72 0.122 166.0, 228.0 -0.8
NOD/ShiLtJ m 243.0 57.3   10 18.1 0.236 123.0, 329.0 0.11
NZO/HlLtJ m 214.0 37.6   16 9.4 0.176 135.0, 261.0 -0.4
PWK/PhJ m 346.0 38.2   15 9.85 0.11 271.0, 414.0 1.91
WSB/EiJ m 293.0 50.1   18 11.8 0.171 110.0, 326.0 0.98


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 207.0353 9.3643 225.597 188.4736
A/J m 228.1882 9.3643 246.75 209.6265
C57BL/6J m 171.6273 11.6414 194.7025 148.552
CAST/EiJ m 190.8583 11.1458 212.9512 168.7655
NOD/ShiLtJ m 243.04 12.2096 267.2415 218.8385
NZO/HlLtJ m 213.85 9.6525 232.983 194.717
PWK/PhJ m 345.9067 9.9691 365.6671 326.1462
WSB/EiJ m 292.8611 9.1005 310.8999 274.8224




  GWAS USING LINEAR MIXED MODELS