Project measure / variable:   Odet2   sperm_VSL_90

ID, description, units MPD:53864   sperm_VSL_90   sperm mean straight line velocity   [µm/s]  at 90 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - sperm mean straight line velocity at 90 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means56.1   µm/s
Median of the strain means54.9   µm/s
SD of the strain means± 15.4
Coefficient of variation (CV)0.274
Min–max range of strain means40.8   –   85.0   µm/s
Mean sample size per strain13.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 21408.1552 3058.3079 19.9807 < 0.0001
Residuals 97 14847.1124 153.063


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 48.9 5.9   16 1.47 0.121 39.6, 61.9 -0.47
A/J m 63.9 9.27   14 2.48 0.145 41.4, 79.7 0.5
C57BL/6J m 42.9 12.9   11 3.89 0.3 20.4, 62.1 -0.86
CAST/EiJ m 40.8 4.92   12 1.42 0.121 31.2, 49.8 -1.0
NOD/ShiLtJ m 41.8 10.6   10 3.36 0.255 28.5, 64.2 -0.93
NZO/HlLtJ m 64.8 10.6   15 2.74 0.164 47.2, 81.6 0.56
PWK/PhJ m 60.9 18.7   13 5.18 0.307 37.6, 98.4 0.31
WSB/EiJ m 85.0 18.6   14 4.97 0.219 58.0, 114.0 1.88


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 48.875 3.093 55.0137 42.7363
A/J m 63.9286 3.3065 70.4911 57.366
C57BL/6J m 42.9455 3.7303 50.349 35.5419
CAST/EiJ m 40.8083 3.5714 47.8967 33.72
NOD/ShiLtJ m 41.78 3.9123 49.5449 34.0151
NZO/HlLtJ m 64.78 3.1944 71.12 58.44
PWK/PhJ m 60.9231 3.4313 67.7333 54.1128
WSB/EiJ m 84.9571 3.3065 91.5197 78.3946




  GWAS USING LINEAR MIXED MODELS