Project measure / variable:   Odet2   sperm_VSL_30

ID, description, units MPD:53862   sperm_VSL_30   sperm mean straight line velocity   [µm/s]  at 30 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - sperm mean straight line velocity at 30 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means77.0   µm/s
Median of the strain means71.5   µm/s
SD of the strain means± 18.3
Coefficient of variation (CV)0.237
Min–max range of strain means56.9   –   107   µm/s
Mean sample size per strain13.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 32242.009 4606.0013 17.5399 < 0.0001
Residuals 97 25472.3894 262.602


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 60.5 12.5   15 3.22 0.206 38.6, 83.3 -0.9
A/J m 73.0 22.0   16 5.51 0.302 16.3, 103.0 -0.22
C57BL/6J m 66.9 17.6   11 5.31 0.264 32.7, 89.3 -0.55
CAST/EiJ m 56.9 3.89   12 1.12 0.0683 51.6, 65.1 -1.1
NOD/ShiLtJ m 70.0 18.7   10 5.91 0.267 45.6, 95.3 -0.38
NZO/HlLtJ m 80.8 8.4   12 2.43 0.104 70.0, 99.2 0.21
PWK/PhJ m 101.0 24.0   15 6.2 0.237 70.1, 150.0 1.31
WSB/EiJ m 107.0 7.51   14 2.01 0.0703 95.1, 124.0 1.64


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 60.4667 4.1841 68.771 52.1624
A/J m 73.0 4.0512 81.0406 64.9594
C57BL/6J m 66.8727 4.886 76.5701 57.1754
CAST/EiJ m 56.9417 4.678 66.2262 47.6572
NOD/ShiLtJ m 69.98 5.1245 80.1507 59.8093
NZO/HlLtJ m 80.825 4.678 90.1095 71.5405
PWK/PhJ m 101.2533 4.1841 109.5576 92.949
WSB/EiJ m 106.9071 4.331 115.5029 98.3114




  GWAS USING LINEAR MIXED MODELS