Project measure / variable:   Odet2   sperm_slow_90

ID, description, units MPD:53844   sperm_slow_90   percentage of motile sperm that are 'slow'   [%]  at 90 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - percentage of motile sperm that are 'slow' at 90 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means46.8   %
Median of the strain means46.2   %
SD of the strain means± 11.2
Coefficient of variation (CV)0.240
Min–max range of strain means27.5   –   59.2   %
Mean sample size per strain13.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 11987.0799 1712.44 21.7546 < 0.0001
Residuals 97 7635.4806 78.7163


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 59.2 7.0   16 1.75 0.118 49.1, 69.2 1.11
A/J m 43.8 7.2   14 1.92 0.165 32.9, 57.8 -0.26
C57BL/6J m 59.1 12.7   11 3.84 0.216 36.5, 77.5 1.1
CAST/EiJ m 56.4 6.35   12 1.83 0.112 45.2, 63.9 0.86
NOD/ShiLtJ m 48.6 9.24   10 2.92 0.19 36.2, 62.1 0.16
NZO/HlLtJ m 39.4 6.17   15 1.59 0.156 26.5, 50.8 -0.65
PWK/PhJ m 40.0 11.3   13 3.13 0.282 20.7, 68.1 -0.6
WSB/EiJ m 27.5 10.1   14 2.7 0.367 15.1, 50.2 -1.71


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 59.175 2.2181 63.5772 54.7728
A/J m 43.7571 2.3712 48.4633 39.051
C57BL/6J m 59.0545 2.6751 64.3638 53.7453
CAST/EiJ m 56.45 2.5612 61.5333 51.3667
NOD/ShiLtJ m 48.6 2.8056 54.1684 43.0316
NZO/HlLtJ m 39.44 2.2908 43.9866 34.8934
PWK/PhJ m 40.0231 2.4607 44.9069 35.1392
WSB/EiJ m 27.5 2.3712 32.2062 22.7938




  GWAS USING LINEAR MIXED MODELS