Project measure / variable:   Odet2   sperm_slow_30

ID, description, units MPD:53842   sperm_slow_30   percentage of motile sperm that are 'slow'   [%]  at 30 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - percentage of motile sperm that are 'slow' at 30 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means37.2   %
Median of the strain means40.1   %
SD of the strain means± 13.6
Coefficient of variation (CV)0.366
Min–max range of strain means13.5   –   53.6   %
Mean sample size per strain13.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 17720.4041 2531.4863 16.7521 < 0.0001
Residuals 97 14658.1515 151.115


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 49.7 8.23   15 2.12 0.166 31.7, 59.8 0.92
A/J m 37.1 12.1   16 3.04 0.327 20.1, 59.8 -0.01
C57BL/6J m 43.3 16.3   11 4.91 0.376 23.4, 68.9 0.45
CAST/EiJ m 53.6 7.7   12 2.22 0.144 40.9, 65.9 1.2
NOD/ShiLtJ m 43.1 22.9   10 7.25 0.531 13.1, 70.4 0.43
NZO/HlLtJ m 35.6 6.93   12 2.0 0.194 24.7, 46.7 -0.12
PWK/PhJ m 21.8 13.9   15 3.58 0.634 3.2, 46.2 -1.13
WSB/EiJ m 13.5 4.38   14 1.17 0.324 5.3, 20.1 -1.74


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 49.7 3.174 55.9995 43.4005
A/J m 37.1187 3.0732 43.2182 31.0193
C57BL/6J m 43.3182 3.7064 50.6744 35.9619
CAST/EiJ m 53.6167 3.5486 60.6598 46.5736
NOD/ShiLtJ m 43.15 3.8874 50.8653 35.4347
NZO/HlLtJ m 35.625 3.5486 42.6681 28.5819
PWK/PhJ m 21.8467 3.174 28.1462 15.5471
WSB/EiJ m 13.5071 3.2854 20.0278 6.9865




  GWAS USING LINEAR MIXED MODELS