Project measure / variable:   Odet2   sperm_int_10

ID, description, units MPD:53821   sperm_int_10   percentage of motile sperm that are 'intermediate'   [%]  at 10 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - percentage of motile sperm that are 'intermediate' at 10 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means6.23   %
Median of the strain means3.29   %
SD of the strain means± 7.78
Coefficient of variation (CV)1.25
Min–max range of strain means0.300   –   24.4   %
Mean sample size per strain14.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 6276.7185 896.6741 24.3872 < 0.0001
Residuals 108 3970.967 36.7682


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 2.56 2.6   17 0.631 1.01 -0.47
A/J m 3.99 4.34   17 1.05 1.09 -0.29
C57BL/6J m 0.3 0.438   11 0.132 1.46 -0.76
CAST/EiJ m 5.24 2.0   12 0.577 0.382 1.6, 9.0 -0.13
NOD/ShiLtJ m 8.86 8.67   10 2.74 0.978 0.7, 23.1 0.34
NZO/HlLtJ m 1.9 1.75   16 0.438 0.923 -0.56
PWK/PhJ m 24.4 13.9   15 3.58 0.568 3.7, 44.2 2.34
WSB/EiJ m 2.6 2.47   18 0.582 0.949 -0.47


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 2.5647 1.4707 5.4798 0.0
A/J m 3.9882 1.4707 6.9033 1.0731
C57BL/6J m 0.3 1.8283 3.9239 0.0
CAST/EiJ m 5.2417 1.7504 8.7113 1.772
NOD/ShiLtJ m 8.86 1.9175 12.6608 5.0592
NZO/HlLtJ m 1.9 1.5159 4.9048 0.0
PWK/PhJ m 24.4133 1.5656 27.5167 21.31
WSB/EiJ m 2.6 1.4292 5.433 0.0




  GWAS USING LINEAR MIXED MODELS