Project measure / variable:   Odet2   sperm_prog_30

ID, description, units MPD:53816   sperm_prog_30   percentage of motile sperm that are 'progressive'   [%]  at 30 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - percentage of motile sperm that are 'progressive' at 30 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means36.6   %
Median of the strain means33.0   %
SD of the strain means± 16.9
Coefficient of variation (CV)0.463
Min–max range of strain means14.7   –   69.7   %
Mean sample size per strain13.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 26977.2375 3853.8911 24.5893 < 0.0001
Residuals 97 15202.8782 156.7307


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 22.6 11.2   15 2.89 0.496 5.7, 40.5 -0.83
A/J m 35.8 15.9   16 3.98 0.445 -0.05
C57BL/6J m 29.6 18.2   11 5.5 0.617 1.2, 56.8 -0.41
CAST/EiJ m 14.7 4.57   12 1.32 0.311 9.9, 26.9 -1.29
NOD/ShiLtJ m 30.3 18.1   10 5.71 0.597 8.3, 58.4 -0.37
NZO/HlLtJ m 43.4 8.04   12 2.32 0.185 32.5, 61.3 0.4
PWK/PhJ m 46.4 9.72   15 2.51 0.21 30.6, 60.0 0.58
WSB/EiJ m 69.7 9.22   14 2.47 0.132 55.2, 88.8 1.96


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 22.5733 3.2324 28.9888 16.1578
A/J m 35.8 3.1298 42.0118 29.5882
C57BL/6J m 29.5909 3.7747 37.0826 22.0992
CAST/EiJ m 14.6833 3.614 21.8561 7.5106
NOD/ShiLtJ m 30.28 3.9589 38.1374 22.4226
NZO/HlLtJ m 43.425 3.614 50.5978 36.2522
PWK/PhJ m 46.36 3.2324 52.7755 39.9445
WSB/EiJ m 69.7286 3.3459 76.3693 63.0879




  GWAS USING LINEAR MIXED MODELS