Project measure / variable:   Tarantino2   OFT_movement_ctrl

ID, description, units MPD:50606   OFT_movement_ctrl   time spent mobile, 10 min test   [s]  control  
ovariectomy study
Data set, strains Tarantino2   inbred   37 strains     sex: f     age: 10-12wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Tarantino2 - time spent mobile, 10 min test control



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested37 strains
Mean of the strain means198   s
Median of the strain means203   s
SD of the strain means± 67.6
Coefficient of variation (CV)0.342
Min–max range of strain means65.1   –   365   s
Mean sample size per strain9.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 36 1465214.8995 40700.4139 16.5291 < 0.0001
Residuals 316 778101.7701 2462.3474


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 78.9 54.4   10 17.2 0.69 10.1, 155.0 -1.75
A/J f 65.1 43.2   11 13.0 0.664 1.1, 125.0 -1.96
AKR/J f 256.0 48.9   11 14.8 0.191 186.0, 336.0 0.86
BALB/cByJ f 195.0 23.1   11 6.97 0.119 148.0, 227.0 -0.04
BTBR T+ Itpr3tf/J f 217.0 41.6   11 12.5 0.192 132.0, 282.0 0.29
C3H/HeJ f 123.0 22.4   11 6.77 0.183 87.3, 158.0 -1.1
C57BL/6J f 236.0 47.5   20 10.6 0.201 118.0, 330.0 0.57
C57BR/cdJ f 365.0 87.8   6 35.8 0.24 279.0, 508.0 2.48
C57L/J f 202.0 47.7   11 14.4 0.236 153.0, 305.0 0.07
C58/J f 295.0 102.0   10 32.2 0.345 187.0, 480.0 1.44
CBA/J f 118.0 38.3   11 11.5 0.324 58.0, 171.0 -1.18
CZECHII/EiJ f 155.0 12.8   5 5.74 0.0829 141.0, 173.0 -0.63
DBA/2J f 96.6 46.3   9 15.4 0.479 11.4, 156.0 -1.49
FVB/NJ f 203.0 21.4   10 6.76 0.105 165.0, 240.0 0.08
I/LnJ f 232.0 50.5   12 14.6 0.218 116.0, 300.0 0.51
KK/HlJ f 184.0 48.2   6 19.7 0.261 117.0, 248.0 -0.2
LG/J f 213.0 63.9   10 20.2 0.3 37.2, 258.0 0.23
LP/J f 146.0 42.8   9 14.3 0.293 84.3, 227.0 -0.76
MA/MyJ f 295.0 48.4   9 16.1 0.164 241.0, 400.0 1.44
MOLF/EiJ f 193.0 40.7   7 15.4 0.21 164.0, 278.0 -0.07
MRL/MpJ f 221.0 33.1   10 10.5 0.15 182.0, 294.0 0.35
NOD/ShiLtJ f 240.0 88.5   10 28.0 0.369 93.6, 423.0 0.63
NON/ShiLtJ f 281.0 98.3   12 28.4 0.35 166.0, 529.0 1.23
NOR/LtJ f 248.0 44.8   12 12.9 0.181 178.0, 317.0 0.75
NZO/HlLtJ f 77.7 26.9   7 10.2 0.347 21.9, 101.0 -1.77
NZW/LacJ f 169.0 21.8   10 6.88 0.129 126.0, 200.0 -0.42
PERA/EiJ f 154.0 37.0   8 13.1 0.241 117.0, 209.0 -0.64
P/J f 220.0 37.4   8 13.2 0.17 161.0, 270.0 0.33
PL/J f 229.0 26.9   10 8.5 0.117 186.0, 270.0 0.47
PWD/PhJ f 146.0 19.3   6 7.87 0.132 112.0, 170.0 -0.76
RIIIS/J f 230.0 33.1   6 13.5 0.144 177.0, 271.0 0.48
SEA/GnJ f 136.0 34.3   6 14.0 0.253 100.0, 186.0 -0.91
SJL/J f 172.0 39.3   10 12.4 0.228 108.0, 234.0 -0.38
SM/J f 216.0 43.4   12 12.5 0.201 157.0, 294.0 0.27
SWR/J f 205.0 22.5   12 6.5 0.11 161.0, 238.0 0.11
WSB/EiJ f 313.0 63.3   8 22.4 0.202 199.0, 401.0 1.71
ZALENDE/EiJ f 183.0 23.5   6 9.59 0.128 155.0, 215.0 -0.22


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 78.86 15.6919 109.7337 47.9863
A/J f 65.0545 14.9616 94.4915 35.6176
AKR/J f 255.5727 14.9616 285.0097 226.1358
BALB/cByJ f 195.0273 14.9616 224.4642 165.5903
BTBR T+ Itpr3tf/J f 216.7 14.9616 246.137 187.263
C3H/HeJ f 122.6636 14.9616 152.1006 93.2267
C57BL/6J f 235.87 11.0958 257.701 214.039
C57BR/cdJ f 365.3167 20.2581 405.1745 325.4588
C57L/J f 202.3 14.9616 231.737 172.863
C58/J f 295.49 15.6919 326.3637 264.6163
CBA/J f 118.1909 14.9616 147.6279 88.7539
CZECHII/EiJ f 154.76 22.1917 198.4221 111.0979
DBA/2J f 96.6444 16.5407 129.1882 64.1007
FVB/NJ f 203.08 15.6919 233.9537 172.2063
I/LnJ f 232.1 14.3247 260.2837 203.9163
KK/HlJ f 184.1667 20.2581 224.0245 144.3088
LG/J f 212.69 15.6919 243.5637 181.8163
LP/J f 145.9333 16.5407 178.4771 113.3895
MA/MyJ f 294.5889 16.5407 327.1327 262.0451
MOLF/EiJ f 193.4857 18.7554 230.3869 156.5845
MRL/MpJ f 221.05 15.6919 251.9237 190.1763
NOD/ShiLtJ f 239.96 15.6919 270.8337 209.0863
NON/ShiLtJ f 280.8667 14.3247 309.0504 252.6829
NOR/LtJ f 247.8333 14.3247 276.0171 219.6496
NZO/HlLtJ f 77.7 18.7554 114.6012 40.7988
NZW/LacJ f 169.16 15.6919 200.0337 138.2863
PERA/EiJ f 153.5875 17.544 188.1054 119.0696
P/J f 220.4875 17.544 255.0054 185.9696
PL/J f 229.32 15.6919 260.1937 198.4463
PWD/PhJ f 146.45 20.2581 186.3078 106.5922
RIIIS/J f 229.7167 20.2581 269.5745 189.8588
SEA/GnJ f 135.8833 20.2581 175.7412 96.0255
SJL/J f 172.38 15.6919 203.2537 141.5063
SM/J f 215.925 14.3247 244.1087 187.7413
SWR/J f 205.0417 14.3247 233.2254 176.8579
WSB/EiJ f 312.8625 17.544 347.3804 278.3446
ZALENDE/EiJ f 183.4667 20.2581 223.3245 143.6088




  GWAS USING LINEAR MIXED MODELS