Phenotype measure:   HMDPpheno7   acetylphosphate

ID, description, units MPD:50245   acetylphosphate   acetylphosphate (16h fast), relative abundance  
Data set, strains HMDPpheno7   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno7 - acetylphosphate (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means2406037   None
Median of the strain means2427112   None
SD of the strain means± 455167
Coefficient of variation (CV)0.189
Min–max range of strain means1452295   –   4095475   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 5329048598525.14 253764218977.388 1.1187 0.3763
Residuals 34 7712731635944.09 226845048116.003


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 2972124.0 0.0   1   0.0 0.0 2972124.0, 2972124.0 1.24
A/J m 2555163.0 77778.0   2   54997.0 0.0304 2500166.0, 2610160.0 0.33
AKR/J m 1985738.0 0.0   1   0.0 0.0 1985738.0, 1985738.0 -0.92
AXB10/PgnJ m 2464170.0 0.0   1   0.0 0.0 2464170.0, 2464170.0 0.13
AXB12/PgnJ m 2354723.0 0.0   1   0.0 0.0 2354723.0, 2354723.0 -0.11
AXB13/PgnJ m 2167716.0 0.0   1   0.0 0.0 2167716.0, 2167716.0 -0.52
AXB15/PgnJ m 1882704.0 0.0   1   0.0 0.0 1882704.0, 1882704.0 -1.15
AXB19a/PgnJ m 2959092.0 0.0   1   0.0 0.0 2959092.0, 2959092.0 1.22
AXB19b/PgnJ m 2438160.0 590157.0   2   417304.0 0.242 2020856.0, 2855464.0 0.07
AXB19/PgnJ m 2076519.0 0.0   1   0.0 0.0 2076519.0, 2076519.0 -0.72
AXB1/PgnJ m 3026762.0 0.0   1   0.0 0.0 3026762.0, 3026762.0 1.36
AXB23/PgnJ m 1946535.0 0.0   1   0.0 0.0 1946535.0, 1946535.0 -1.01
AXB24/PgnJ m 1961961.0 578440.0   2   409019.0 0.295 1552942.0, 2370980.0 -0.98
AXB2/PgnJ m 2543758.0 0.0   1   0.0 0.0 2543758.0, 2543758.0 0.3
AXB4/PgnJ m 2642406.0 0.0   1   0.0 0.0 2642406.0, 2642406.0 0.52
AXB5/PgnJ m 2202431.0 0.0   1   0.0 0.0 2202431.0, 2202431.0 -0.45
AXB6/PgnJ m 2477810.0 0.0   1   0.0 0.0 2477810.0, 2477810.0 0.16
AXB8/PgnJ m 1844412.0 0.0   1   0.0 0.0 1844412.0, 1844412.0 -1.23
BALB/cJ m 2551954.0 76590.0   3 44219.0 0.03 2472900.0, 2625816.0 0.32
BTBR T+ Itpr3tf/J m 2150418.0 0.0   1   0.0 0.0 2150418.0, 2150418.0 -0.56
BUB/BnJ m 1871016.0 0.0   1   0.0 0.0 1871016.0, 1871016.0 -1.18
BXA11/PgnJ m 2025846.0 0.0   1   0.0 0.0 2025846.0, 2025846.0 -0.84
BXA12/PgnJ m 2323922.0 0.0   1   0.0 0.0 2323922.0, 2323922.0 -0.18
BXA13/PgnJ m 2650060.0 0.0   1   0.0 0.0 2650060.0, 2650060.0 0.54
BXA14/PgnJ m 2292814.0 0.0   1   0.0 0.0 2292814.0, 2292814.0 -0.25
BXA16/PgnJ m 2037731.0 107538.0   2   76041.0 0.0528 1961690.0, 2113772.0 -0.81
BXA1/PgnJ m 2622848.0 0.0   1   0.0 0.0 2622848.0, 2622848.0 0.48
BXA24/PgnJ m 2431366.0 0.0   1   0.0 0.0 2431366.0, 2431366.0 0.06
BXA25/PgnJ m 3877082.0 0.0   1   0.0 0.0 3877082.0, 3877082.0 3.23
BXA26/PgnJ m 1487865.0 0.0   1   0.0 0.0 1487865.0, 1487865.0 -2.02
BXA2/PgnJ m 2089868.0 0.0   1   0.0 0.0 2089868.0, 2089868.0 -0.69
BXA4/PgnJ m 2446116.0 0.0   1   0.0 0.0 2446116.0, 2446116.0 0.09
BXA7/PgnJ m 2203882.0 0.0   1   0.0 0.0 2203882.0, 2203882.0 -0.44
BXA8/PgnJ m 2028535.0 0.0   1   0.0 0.0 2028535.0, 2028535.0 -0.83
BXD11/TyJ m 2795416.0 0.0   1   0.0 0.0 2795416.0, 2795416.0 0.86
BXD12/TyJ m 1770673.0 0.0   1   0.0 0.0 1770673.0, 1770673.0 -1.4
BXD13/TyJ m 2390054.0 0.0   1   0.0 0.0 2390054.0, 2390054.0 -0.04
BXD14/TyJ m 2130991.0 0.0   1   0.0 0.0 2130991.0, 2130991.0 -0.6
BXD15/TyJ m 1645536.0 0.0   1   0.0 0.0 1645536.0, 1645536.0 -1.67
BXD18/TyJ m 2235272.0 0.0   1   0.0 0.0 2235272.0, 2235272.0 -0.38
BXD19/TyJ m 2191752.0 579464.0   2   409743.0 0.264 1782009.0, 2601495.0 -0.47
BXD1/TyJ m 2672180.0 0.0   1   0.0 0.0 2672180.0, 2672180.0 0.58
BXD20/TyJ m 2428306.0 0.0   1   0.0 0.0 2428306.0, 2428306.0 0.05
BXD21/TyJ m 2259283.0 0.0   1   0.0 0.0 2259283.0, 2259283.0 -0.32
BXD22/TyJ m 2483245.0 0.0   1   0.0 0.0 2483245.0, 2483245.0 0.17
BXD24/TyJ m 3777692.0 0.0   1   0.0 0.0 3777692.0, 3777692.0 3.01
BXD24/TyJ-Cep290rd16/J m 2747668.0 0.0   1   0.0 0.0 2747668.0, 2747668.0 0.75
BXD28/TyJ m 2115336.0 672718.0   2   475683.0 0.318 1639653.0, 2591019.0 -0.64
BXD29-Tlr4lps-2J/J m 2697080.0 0.0   1   0.0 0.0 2697080.0, 2697080.0 0.64
BXD2/TyJ m 2276588.0 0.0   1   0.0 0.0 2276588.0, 2276588.0 -0.28
BXD32/TyJ m 2298910.0 0.0   1   0.0 0.0 2298910.0, 2298910.0 -0.24
BXD33/TyJ m 2782251.0 0.0   1   0.0 0.0 2782251.0, 2782251.0 0.83
BXD34/TyJ m 2759322.0 0.0   1   0.0 0.0 2759322.0, 2759322.0 0.78
BXD36/TyJ m 2422859.0 0.0   1   0.0 0.0 2422859.0, 2422859.0 0.04
BXD38/TyJ m 2681643.0 0.0   1   0.0 0.0 2681643.0, 2681643.0 0.61
BXD39/TyJ m 1715042.0 0.0   1   0.0 0.0 1715042.0, 1715042.0 -1.52
BXD40/TyJ m 2429726.0 0.0   1   0.0 0.0 2429726.0, 2429726.0 0.05
BXD42/TyJ m 1990208.0 0.0   1   0.0 0.0 1990208.0, 1990208.0 -0.91
BXD5/TyJ m 2693160.0 0.0   1   0.0 0.0 2693160.0, 2693160.0 0.63
BXD6/TyJ m 2307508.0 0.0   1   0.0 0.0 2307508.0, 2307508.0 -0.22
BXD8/TyJ m 1867108.0 0.0   1   0.0 0.0 1867108.0, 1867108.0 -1.18
BXD9/TyJ m 2427449.0 0.0   1   0.0 0.0 2427449.0, 2427449.0 0.05
BXH10/TyJ m 2500134.0 0.0   1   0.0 0.0 2500134.0, 2500134.0 0.21
BXH19/TyJ m 2643567.0 0.0   1   0.0 0.0 2643567.0, 2643567.0 0.52
BXH20/KccJ m 2100094.0 0.0   1   0.0 0.0 2100094.0, 2100094.0 -0.67
BXH22/KccJ m 2731640.0 0.0   1   0.0 0.0 2731640.0, 2731640.0 0.72
BXH2/TyJ m 2809682.0 0.0   1   0.0 0.0 2809682.0, 2809682.0 0.89
BXH4/TyJ m 2855128.0 476773.0   2   337129.0 0.167 2517999.0, 3192258.0 0.99
BXH6/TyJ m 2325790.0 0.0   1   0.0 0.0 2325790.0, 2325790.0 -0.18
BXH7/TyJ m 2863432.0 0.0   1   0.0 0.0 2863432.0, 2863432.0 1.0
BXH8/TyJ m 2734780.0 0.0   1   0.0 0.0 2734780.0, 2734780.0 0.72
BXH9/TyJ m 2426776.0 0.0   1   0.0 0.0 2426776.0, 2426776.0 0.05
C3H/HeJ m 2319170.0 391982.0   2   277173.0 0.169 2041997.0, 2596342.0 -0.19
C57BL/6J m 2368405.0 335525.0   5 150051.0 0.142 2056054.0, 2909717.0 -0.08
C57L/J m 2503578.0 0.0   1   0.0 0.0 2503578.0, 2503578.0 0.21
C58/J m 2492615.0 0.0   1   0.0 0.0 2492615.0, 2492615.0 0.19
CAST/EiJ m 2648644.0 0.0   1   0.0 0.0 2648644.0, 2648644.0 0.53
CBA/J m 1646013.0 0.0   1   0.0 0.0 1646013.0, 1646013.0 -1.67
CE/J m 1921299.0 0.0   1   0.0 0.0 1921299.0, 1921299.0 -1.06
CXB11/HiAJ m 1979728.0 398324.0   2   281658.0 0.201 1698070.0, 2261386.0 -0.94
CXB12/HiAJ m 2494027.0 1146533.0   2   810722.0 0.46 1683305.0, 3304748.0 0.19
CXB13/HiAJ m 2451933.0 605400.0   3 349528.0 0.247 1824073.0, 3032045.0 0.1
CXB1/ByJ m 2527262.0 258598.0   3 149302.0 0.102 2334684.0, 2821182.0 0.27
CXB2/ByJ m 2321726.0 753426.0   3 434990.0 0.325 1489681.0, 2957808.0 -0.19
CXB3/ByJ m 2746846.0 199689.0   2   141202.0 0.0727 2605644.0, 2888048.0 0.75
CXB4/ByJ m 2758255.0 361749.0   2   255795.0 0.131 2502460.0, 3014050.0 0.77
CXB6/ByJ m 2028915.0 236894.0   3 136771.0 0.117 1757451.0, 2193791.0 -0.83
CXB7/ByJ m 1668847.0 90410.0   2   63929.0 0.0542 1604918.0, 1732776.0 -1.62
CXB8/HiAJ m 2290299.0 271026.0   3 156477.0 0.118 2125247.0, 2603093.0 -0.25
CXB9/HiAJ m 1945092.0 212836.0   3 122881.0 0.109 1771937.0, 2182706.0 -1.01
DBA/2J m 2876106.0 677492.0   4 338746.0 0.236 2297558.0, 3834272.0 1.03
FVB/NJ m 4095475.0 0.0   1   0.0 0.0 4095475.0, 4095475.0 3.71
I/LnJ m 2881464.0 0.0   1   0.0 0.0 2881464.0, 2881464.0 1.04
KK/HlJ m 2067488.0 0.0   1   0.0 0.0 2067488.0, 2067488.0 -0.74
LG/J m 2896045.0 0.0   1   0.0 0.0 2896045.0, 2896045.0 1.08
LP/J m 2445939.0 0.0   1   0.0 0.0 2445939.0, 2445939.0 0.09
MA/MyJ m 2983532.0 0.0   1   0.0 0.0 2983532.0, 2983532.0 1.27
NOD/ShiLtJ m 1452295.0 0.0   1   0.0 0.0 1452295.0, 1452295.0 -2.1
NON/ShiLtJ m 2539461.0 0.0   1   0.0 0.0 2539461.0, 2539461.0 0.29
NZW/LacJ m 1700601.0 0.0   1   0.0 0.0 1700601.0, 1700601.0 -1.55
PL/J m 3273971.0 0.0   1   0.0 0.0 3273971.0, 3273971.0 1.91
RIIIS/J m 2933755.0 0.0   1   0.0 0.0 2933755.0, 2933755.0 1.16
SEA/GnJ m 2075394.0 0.0   1   0.0 0.0 2075394.0, 2075394.0 -0.73
SJL/J m 2018935.0 0.0   1   0.0 0.0 2018935.0, 2018935.0 -0.85
SM/J m 2196920.0 0.0   1   0.0 0.0 2196920.0, 2196920.0 -0.46
SWR/J m 2913078.0 0.0   1   0.0 0.0 2913078.0, 2913078.0 1.11


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 2555163.0 336782.6065 3239587.6029 1870738.3971
AXB19b/PgnJ m 2438160.1 336782.6065 3122584.7029 1753735.4971
AXB24/PgnJ m 1961960.85 336782.6065 2646385.4529 1277536.2471
BALB/cJ m 2551953.8333 274981.8467 3110784.1815 1993123.4851
BXA16/PgnJ m 2037731.2 336782.6065 2722155.8029 1353306.5971
BXD19/TyJ m 2191752.1 336782.6065 2876176.7029 1507327.4971
BXD28/TyJ m 2115336.1 336782.6065 2799760.7029 1430911.4971
BXH4/TyJ m 2855128.4 336782.6065 3539553.0029 2170703.7971
C3H/HeJ m 2319169.55 336782.6065 3003594.1529 1634744.9471
C57BL/6J m 2368405.38 213000.0226 2801273.5064 1935537.2536
CXB11/HiAJ m 1979727.65 336782.6065 2664152.2529 1295303.0471
CXB12/HiAJ m 2494026.9 336782.6065 3178451.5029 1809602.2971
CXB13/HiAJ m 2451932.8667 274981.8467 3010763.2149 1893102.5185
CXB1/ByJ m 2527261.5 274981.8467 3086091.8482 1968431.1518
CXB2/ByJ m 2321726.0333 274981.8467 2880556.3815 1762895.6851
CXB3/ByJ m 2746845.9 336782.6065 3431270.5029 2062421.2971
CXB4/ByJ m 2758254.65 336782.6065 3442679.2529 2073830.0471
CXB6/ByJ m 2028915.3 274981.8467 2587745.6482 1470084.9518
CXB7/ByJ m 1668847.2 336782.6065 2353271.8029 984422.5971
CXB8/HiAJ m 2290298.7667 274981.8467 2849129.1149 1731468.4185
CXB9/HiAJ m 1945091.8 274981.8467 2503922.1482 1386261.4518
DBA/2J m 2876105.7 238141.2649 3360066.978 2392144.422




  GWAS USING LINEAR MIXED MODELS