Project measure / variable:   HMDPpheno6   acetyl_Gly

ID, description, units MPD:50127   acetyl_Gly   liver N-acetylglycine (16h fast), relative abundance    
Data set, strains HMDPpheno6   HMDP w/par   96 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno6 - liver N-acetylglycine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested96 strains
Mean of the strain means63310   None
Median of the strain means60626   None
SD of the strain means± 23281
Coefficient of variation (CV)0.368
Min–max range of strain means20245   –   124739   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 19 23457483809.8643 1234604411.0455 4.7634 0.0001
Residuals 32 8293989514.7163 259187172.3349


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J m 36499.0 0.0   1   0.0 0.0 36499.0, 36499.0 -1.15
AKR/J m 34803.0 0.0   1   0.0 0.0 34803.0, 34803.0 -1.22
AXB10/PgnJ m 65321.0 0.0   1   0.0 0.0 65321.0, 65321.0 0.09
AXB12/PgnJ m 54221.0 0.0   1   0.0 0.0 54221.0, 54221.0 -0.39
AXB13/PgnJ m 91491.0 0.0   1   0.0 0.0 91491.0, 91491.0 1.21
AXB15/PgnJ m 58909.0 0.0   1   0.0 0.0 58909.0, 58909.0 -0.19
AXB19a/PgnJ m 87289.0 0.0   1   0.0 0.0 87289.0, 87289.0 1.03
AXB19b/PgnJ m 85829.0 3703.0   2   2618.0 0.0431 83211.0, 88447.0 0.97
AXB19/PgnJ m 79826.0 0.0   1   0.0 0.0 79826.0, 79826.0 0.71
AXB1/PgnJ m 49326.0 0.0   1   0.0 0.0 49326.0, 49326.0 -0.6
AXB23/PgnJ m 69922.0 0.0   1   0.0 0.0 69922.0, 69922.0 0.28
AXB24/PgnJ m 44249.0 18471.0   2   13061.0 0.417 31189.0, 57310.0 -0.82
AXB4/PgnJ m 124739.0 0.0   1   0.0 0.0 124739.0, 124739.0 2.64
AXB5/PgnJ m 37314.0 0.0   1   0.0 0.0 37314.0, 37314.0 -1.12
AXB6/PgnJ m 75773.0 0.0   1   0.0 0.0 75773.0, 75773.0 0.54
AXB8/PgnJ m 52697.0 0.0   1   0.0 0.0 52697.0, 52697.0 -0.46
BALB/cJ m 71376.0 6972.0   3 4025.0 0.0977 66397.0, 79344.0 0.35
BTBR T+ Itpr3tf/J m 49929.0 0.0   1   0.0 0.0 49929.0, 49929.0 -0.57
BUB/BnJ m 49537.0 0.0   1   0.0 0.0 49537.0, 49537.0 -0.59
BXA11/PgnJ m 58143.0 0.0   1   0.0 0.0 58143.0, 58143.0 -0.22
BXA12/PgnJ m 47509.0 0.0   1   0.0 0.0 47509.0, 47509.0 -0.68
BXA13/PgnJ m 66660.0 0.0   1   0.0 0.0 66660.0, 66660.0 0.14
BXA14/PgnJ m 47717.0 0.0   1   0.0 0.0 47717.0, 47717.0 -0.67
BXA16/PgnJ m 44909.0 24055.0   2   17010.0 0.536 27899.0, 61918.0 -0.79
BXA1/PgnJ m 70965.0 0.0   1   0.0 0.0 70965.0, 70965.0 0.33
BXA24/PgnJ m 95250.0 0.0   1   0.0 0.0 95250.0, 95250.0 1.37
BXA25/PgnJ m 39605.0 0.0   1   0.0 0.0 39605.0, 39605.0 -1.02
BXA26/PgnJ m 76011.0 0.0   1   0.0 0.0 76011.0, 76011.0 0.55
BXA2/PgnJ m 73769.0 0.0   1   0.0 0.0 73769.0, 73769.0 0.45
BXA4/PgnJ m 87394.0 0.0   1   0.0 0.0 87394.0, 87394.0 1.03
BXA7/PgnJ m 28811.0 0.0   1   0.0 0.0 28811.0, 28811.0 -1.48
BXA8/PgnJ m 43154.0 0.0   1   0.0 0.0 43154.0, 43154.0 -0.87
BXD12/TyJ m 100193.0 0.0   1   0.0 0.0 100193.0, 100193.0 1.58
BXD13/TyJ m 56478.0 0.0   1   0.0 0.0 56478.0, 56478.0 -0.29
BXD14/TyJ m 112439.0 0.0   1   0.0 0.0 112439.0, 112439.0 2.11
BXD15/TyJ m 50910.0 0.0   1   0.0 0.0 50910.0, 50910.0 -0.53
BXD18/TyJ m 43881.0 0.0   1   0.0 0.0 43881.0, 43881.0 -0.83
BXD19/TyJ m 67202.0 40662.0   2   28752.0 0.605 38450.0, 95954.0 0.17
BXD20/TyJ m 45557.0 0.0   1   0.0 0.0 45557.0, 45557.0 -0.76
BXD21/TyJ m 42603.0 0.0   1   0.0 0.0 42603.0, 42603.0 -0.89
BXD22/TyJ m 63205.0 0.0   1   0.0 0.0 63205.0, 63205.0 0.0
BXD24/TyJ-Cep290rd16/J m 33630.0 0.0   1   0.0 0.0 33630.0, 33630.0 -1.27
BXD28/TyJ m 86870.0 21660.0   2   15316.0 0.249 71554.0, 102186.0 1.01
BXD29-Tlr4lps-2J/J m 58349.0 0.0   1   0.0 0.0 58349.0, 58349.0 -0.21
BXD2/TyJ m 74254.0 0.0   1   0.0 0.0 74254.0, 74254.0 0.47
BXD32/TyJ m 115732.0 0.0   1   0.0 0.0 115732.0, 115732.0 2.25
BXD33/TyJ m 83660.0 0.0   1   0.0 0.0 83660.0, 83660.0 0.87
BXD34/TyJ m 37238.0 0.0   1   0.0 0.0 37238.0, 37238.0 -1.12
BXD36/TyJ m 33708.0 0.0   1   0.0 0.0 33708.0, 33708.0 -1.27
BXD38/TyJ m 32969.0 0.0   1   0.0 0.0 32969.0, 32969.0 -1.3
BXD39/TyJ m 66215.0 0.0   1   0.0 0.0 66215.0, 66215.0 0.12
BXD40/TyJ m 44348.0 0.0   1   0.0 0.0 44348.0, 44348.0 -0.81
BXD42/TyJ m 48129.0 0.0   1   0.0 0.0 48129.0, 48129.0 -0.65
BXD9/TyJ m 66663.0 0.0   1   0.0 0.0 66663.0, 66663.0 0.14
BXH10/TyJ m 20245.0 0.0   1   0.0 0.0 20245.0, 20245.0 -1.85
BXH20/KccJ m 100440.0 0.0   1   0.0 0.0 100440.0, 100440.0 1.59
BXH22/KccJ m 69319.0 0.0   1   0.0 0.0 69319.0, 69319.0 0.26
BXH2/TyJ m 64785.0 0.0   1   0.0 0.0 64785.0, 64785.0 0.06
BXH4/TyJ m 86110.0 4211.0   2   2978.0 0.0489 83132.0, 89087.0 0.98
BXH6/TyJ m 64488.0 0.0   1   0.0 0.0 64488.0, 64488.0 0.05
BXH7/TyJ m 50193.0 0.0   1   0.0 0.0 50193.0, 50193.0 -0.56
BXH8/TyJ m 86434.0 0.0   1   0.0 0.0 86434.0, 86434.0 0.99
BXH9/TyJ m 51934.0 0.0   1   0.0 0.0 51934.0, 51934.0 -0.49
C3H/HeJ m 63340.0 1539.0   2   1088.0 0.0243 62251.0, 64428.0 0.0
C57BL/6J m 104850.0 19340.0   5 8649.0 0.184 86459.0, 133291.0 1.78
C57L/J m 24324.0 0.0   1   0.0 0.0 24324.0, 24324.0 -1.67
C58/J m 94114.0 0.0   1   0.0 0.0 94114.0, 94114.0 1.32
CAST/EiJ m 36096.0 0.0   1   0.0 0.0 36096.0, 36096.0 -1.17
CBA/J m 53462.0 0.0   1   0.0 0.0 53462.0, 53462.0 -0.42
CE/J m 66155.0 0.0   1   0.0 0.0 66155.0, 66155.0 0.12
CXB11/HiAJ m 53160.0 0.0   1   0.0 0.0 53160.0, 53160.0 -0.44
CXB12/HiAJ m 105354.0 7679.0   2   5430.0 0.0729 99924.0, 110784.0 1.81
CXB13/HiAJ m 91405.0 15958.0   3 9213.0 0.175 73810.0, 104944.0 1.21
CXB1/ByJ m 68912.0 13063.0   3 7542.0 0.19 56291.0, 82376.0 0.24
CXB2/ByJ m 82432.0 16298.0   3 9410.0 0.198 65857.0, 98438.0 0.82
CXB3/ByJ m 83822.0 26164.0   2   18501.0 0.312 65321.0, 102323.0 0.88
CXB4/ByJ m 69956.0 9122.0   2   6450.0 0.13 63506.0, 76407.0 0.29
CXB6/ByJ m 74914.0 8422.0   3 4862.0 0.112 68024.0, 84302.0 0.5
CXB7/ByJ m 111218.0 14411.0   2   10190.0 0.13 101028.0, 121408.0 2.06
CXB8/HiAJ m 101933.0 9398.0   3 5426.0 0.0922 96302.0, 112782.0 1.66
CXB9/HiAJ m 84307.0 20843.0   3 12033.0 0.247 60315.0, 97947.0 0.9
DBA/2J m 34461.0 2639.0   4 1320.0 0.0766 31405.0, 37328.0 -1.24
FVB/NJ m 38372.0 0.0   1   0.0 0.0 38372.0, 38372.0 -1.07
I/LnJ m 58338.0 0.0   1   0.0 0.0 58338.0, 58338.0 -0.21
KK/HlJ m 56753.0 0.0   1   0.0 0.0 56753.0, 56753.0 -0.28
LG/J m 42974.0 0.0   1   0.0 0.0 42974.0, 42974.0 -0.87
LP/J m 24198.0 0.0   1   0.0 0.0 24198.0, 24198.0 -1.68
MA/MyJ m 40462.0 0.0   1   0.0 0.0 40462.0, 40462.0 -0.98
NOD/ShiLtJ m 51668.0 0.0   1   0.0 0.0 51668.0, 51668.0 -0.5
NON/ShiLtJ m 57170.0 0.0   1   0.0 0.0 57170.0, 57170.0 -0.26
NZW/LacJ m 54563.0 0.0   1   0.0 0.0 54563.0, 54563.0 -0.38
PL/J m 62342.0 0.0   1   0.0 0.0 62342.0, 62342.0 -0.04
RIIIS/J m 21629.0 0.0   1   0.0 0.0 21629.0, 21629.0 -1.79
SEA/GnJ m 83250.0 0.0   1   0.0 0.0 83250.0, 83250.0 0.86
SJL/J m 54452.0 0.0   1   0.0 0.0 54452.0, 54452.0 -0.38
SWR/J m 70212.0 0.0   1   0.0 0.0 70212.0, 70212.0 0.3


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
AXB19b/PgnJ m 85828.8 11383.9179 109017.0819 62640.5181
AXB24/PgnJ m 44249.4 11383.9179 67437.6819 21061.1181
BALB/cJ m 71375.6667 9294.93 90308.8196 52442.5138
BXA16/PgnJ m 44908.75 11383.9179 68097.0319 21720.4681
BXD19/TyJ m 67201.9 11383.9179 90390.1819 44013.6181
BXD28/TyJ m 86870.4 11383.9179 110058.6819 63682.1181
BXH4/TyJ m 86109.65 11383.9179 109297.9319 62921.3681
C3H/HeJ m 63339.7 11383.9179 86527.9819 40151.4181
C57BL/6J m 104850.42 7199.8218 119515.9772 90184.8628
CXB12/HiAJ m 105353.75 11383.9179 128542.0319 82165.4681
CXB13/HiAJ m 91404.8 9294.93 110337.9529 72471.6471
CXB1/ByJ m 68912.0 9294.93 87845.1529 49978.8471
CXB2/ByJ m 82431.9333 9294.93 101365.0862 63498.7804
CXB3/ByJ m 83822.4 11383.9179 107010.6819 60634.1181
CXB4/ByJ m 69956.5 11383.9179 93144.7819 46768.2181
CXB6/ByJ m 74913.5 9294.93 93846.6529 55980.3471
CXB7/ByJ m 111218.0 11383.9179 134406.2819 88029.7181
CXB8/HiAJ m 101932.7 9294.93 120865.8529 82999.5471
CXB9/HiAJ m 84307.3 9294.93 103240.4529 65374.1471
DBA/2J m 34460.7 8049.6455 50857.2914 18064.1086




  GWAS USING LINEAR MIXED MODELS