Project measure / variable:   Jentsch2   activity_10

ID, description, units MPD:49734   activity_10   horizontal beam breaks   [n]  10 mg/kg  
cocaine study
Data set, strains Jentsch2   BXD   4 strains     sex: f     age: 8-17wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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Jentsch2 - horizontal beam breaks 10 mg/kg



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested4 strains
Mean of the strain means83.2   n
Median of the strain means81.3   n
SD of the strain means± 26.4
Coefficient of variation (CV)0.317
Min–max range of strain means58.4   –   112   n
Mean sample size per strain12.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 3 20959.1602 6986.3867 5.5924 0.0023
Residuals 47 58715.5989 1249.2681


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD31/TyJ f 63.4 29.0   10 9.18 0.458 18.7, 114.0 -0.75
BXD38/TyJ f 58.4 30.8   24 6.28 0.527 16.0, 133.0 -0.94
BXD42/TyJ f 99.2 46.3   13 12.8 0.466 41.7, 191.0 0.6
BXD68/RwwJ f 112.0 35.0   4 17.5 0.313 75.8, 160.0 1.09


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD31/TyJ f 63.405 11.1771 85.8904 40.9196
BXD38/TyJ f 58.3687 7.2148 72.883 43.8545
BXD42/TyJ f 99.1738 9.8029 118.8948 79.4529
BXD68/RwwJ f 111.8625 17.6725 147.415 76.31




GWAS analysis not available: SNP data is not available for enough strains (at least 4)