Project measure / variable:   Jentsch2   activity_5

ID, description, units MPD:49733   activity_5   horizontal beam breaks   [n]  5 mg/kg  
cocaine study
Data set, strains Jentsch2   BXD   4 strains     sex: f     age: 8-17wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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Jentsch2 - horizontal beam breaks 5 mg/kg



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested4 strains
Mean of the strain means50.6   n
Median of the strain means50.9   n
SD of the strain means± 7.25
Coefficient of variation (CV)0.143
Min–max range of strain means43.3   –   57.6   n
Mean sample size per strain12.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 3 2041.4708 680.4903 1.4478 0.2409
Residuals 47 22090.6705 470.0143


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD31/TyJ f 45.6 33.0   10 10.4 0.722 14.4, 102.0 -0.7
BXD38/TyJ f 43.3 19.8   24 4.04 0.458 15.5, 92.4 -1.01
BXD42/TyJ f 57.6 13.9   13 3.87 0.242 34.5, 80.7 0.96
BXD68/RwwJ f 56.1 17.9   4 8.93 0.318 40.9, 79.7 0.75


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD31/TyJ f 45.636 6.8558 59.428 31.844
BXD38/TyJ f 43.2583 4.4254 52.161 34.3556
BXD42/TyJ f 57.5777 6.0129 69.6741 45.4813
BXD68/RwwJ f 56.075 10.8399 77.8821 34.2679




GWAS analysis not available: SNP data is not available for enough strains (at least 4)