Project measure / variable:   Hadsell1   pups_gain

ID, description, units MPD:49402   pups_gain   average daily litter weight gain of cross-fostered pups, days 1-8   [g]  
Data set, strains Hadsell1   inbred   31 strains     sex: f     age: 14-18wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Hadsell1 - average daily litter weight gain of cross-fostered pups, days 1-8



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested31 strains
Mean of the strain means2.75   g
Median of the strain means2.89   g
SD of the strain means± 1.26
Coefficient of variation (CV)0.458
Min–max range of strain means-0.402   –   4.81   g
Mean sample size per strain9.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 30 503.185 16.7728 9.1424 < 0.0001
Residuals 265 486.1751 1.8346


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 3.5 0.738   10 0.233 0.211 2.37, 4.81 0.6
A/J f 0.694 2.32   16 0.579 3.33 -5.6, 3.95 -1.63
AKR/J f 2.81 0.896   8 0.317 0.319 1.33, 3.88 0.05
BALB/cByJ f 3.79 0.401   9 0.134 0.106 3.03, 4.47 0.83
BTBR T+ Itpr3tf/J f 4.56 0.803   12 0.232 0.176 3.55, 6.14 1.44
BUB/BnJ f 2.76 0.891   7 0.337 0.323 1.01, 3.72 0.01
C3H/HeJ f 3.82 0.836   8 0.295 0.219 2.63, 5.05 0.85
C57BL/6J f 2.92 0.742   8 0.262 0.254 1.71, 3.98 0.14
C57L/J f 3.3 0.607   6 0.248 0.184 2.47, 4.22 0.44
C58/J f 2.46 0.582   7 0.22 0.237 1.36, 3.17 -0.23
CBA/J f 2.37 1.07   11 0.323 0.453 -0.39, 3.57 -0.3
CE/J f 3.02 0.635   9 0.212 0.21 2.07, 4.04 0.22
CZECHII/EiJ f -0.402 3.04   5 1.36 -7.56 -5.77, 1.68 -2.51
DBA/1J f 2.52 0.744   8 0.263 0.295 1.22, 3.68 -0.18
DBA/2J f 2.87 0.675   9 0.225 0.235 1.94, 3.64 0.1
FVB/NJ f 4.04 0.903   9 0.301 0.223 2.2, 5.22 1.03
I/LnJ f 3.11 0.431   8 0.153 0.139 2.31, 3.45 0.29
KK/HlJ f 3.35 0.77   15 0.199 0.23 0.78, 4.11 0.48
LG/J f 3.0 0.504   9 0.168 0.168 2.05, 3.77 0.2
LP/J f 2.44 0.876   4 0.438 0.359 1.13, 2.98 -0.25
MA/MyJ f 0.829 1.76   11 0.532 2.13 -2.2, 2.86 -1.53
NOD/ShiLtJ f 3.85 0.542   10 0.171 0.141 2.62, 4.66 0.88


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 3.503 0.4283 4.3464 2.6596
A/J f 0.6944 0.3386 1.3611 0.0276
AKR/J f 2.81 0.4789 3.7529 1.8671
BALB/cByJ f 3.7856 0.4515 4.6745 2.8966
BTBR T+ Itpr3tf/J f 4.565 0.391 5.3349 3.7951
BUB/BnJ f 2.7571 0.5119 3.7651 1.7491
C3H/HeJ f 3.82 0.4789 4.7629 2.8771
C57BL/6J f 2.9238 0.4789 3.8666 1.9809
C57L/J f 3.2983 0.553 4.3871 2.2096
C58/J f 2.4571 0.5119 3.4651 1.4491
CBA/J f 2.3655 0.4084 3.1696 1.5613
CE/J f 3.0222 0.4515 3.9112 2.1332
CZECHII/EiJ f -0.402 0.6057 0.7907 -1.5947
DBA/1J f 2.5225 0.4789 3.4654 1.5796
DBA/2J f 2.8711 0.4515 3.7601 1.9821
FVB/NJ f 4.0422 0.4515 4.9312 3.1532
I/LnJ f 3.1113 0.4789 4.0541 2.1684
KK/HlJ f 3.3473 0.3497 4.0359 2.6587
LG/J f 3.0022 0.4515 3.8912 2.1132
LP/J f 2.4375 0.6772 3.771 1.104
MA/MyJ f 0.8291 0.4084 1.6332 0.025
NOD/ShiLtJ f 3.845 0.4283 4.6884 3.0016
NON/ShiLtJ f 3.7092 0.391 4.479 2.9393
NZW/LacJ f 2.75 0.3757 3.4897 2.0103
PL/J f 0.0962 0.3757 0.8358 -0.6435
QSi5 f 4.8083 0.391 5.5782 4.0385
RIIIS/J f 0.7788 0.3386 1.4455 0.112
SEA/GnJ f 4.2838 0.4789 5.2266 3.3409
SJL/J f 1.9033 0.4515 2.7923 1.0144
SM/J f 2.8867 0.553 3.9754 1.7979
SWR/J f 2.3875 0.4789 3.3304 1.4446




  GWAS USING LINEAR MIXED MODELS