Project measure / variable:   Hackstein1   T_CD8

ID, description, units MPD:49115   T_CD8   bronchoalveolar lavage CD3+ CD8+ T cells (percentage of CD45+ cells)   [%]  
Data set, strains Hackstein1   inbred   5 strains     sex: m     age: 7-11wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Hackstein1 - bronchoalveolar lavage CD3+ CD8+ T cells (percentage of CD45+ cells)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means6.06   %
Median of the strain means5.87   %
SD of the strain means± 1.02
Coefficient of variation (CV)0.168
Min–max range of strain means5.10   –   7.47   %
Mean sample size per strain8.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 4 35.045 8.7612 5.9921 0.0008
Residuals 38 55.5611 1.4621


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S2/SvPasCrl m 5.87 1.4   8 0.497 0.239 3.97, 8.44 -0.18
BALB/cAnNCrl m 6.68 0.808   9 0.269 0.121 5.84, 8.38 0.61
C3H/HeNCrl m 5.1 0.887   9 0.296 0.174 4.0, 6.88 -0.94
C57BL/6NCrl m 7.47 1.93   8 0.684 0.259 3.59, 9.88 1.39
DBA/2NCrl m 5.16 0.712   9 0.237 0.138 4.26, 6.74 -0.88


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPasCrl m 5.8712 0.4275 6.7367 5.0058
BALB/cAnNCrl m 6.6811 0.4031 7.4971 5.8652
C3H/HeNCrl m 5.1011 0.4031 5.9171 4.2852
C57BL/6NCrl m 7.4663 0.4275 8.3317 6.6008
DBA/2NCrl m 5.1633 0.4031 5.9793 4.3474




GWAS analysis not available: SNP data is not available for enough strains (at least 4)