Project measure / variable:   Gould3   FC_preCS_3

ID, description, units MPD:47362   FC_preCS_3   withdrawal study group, percent immobility in altered context chamber, pre-cue   [%]  dose: 3 mg  
nicotine study
Data set, strains Gould3   inbred   8 strains     sex: m     age: 8-12wks
Procedure fear conditioning test
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  STRAIN COMPARISON PLOT
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Gould3 - withdrawal study group, percent immobility in altered context chamber, pre-cue dose: 3 mg



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means6.68   %
Median of the strain means1.43   %
SD of the strain means± 13.6
Coefficient of variation (CV)2.04
Min–max range of strain means0   –   40.0   %
Mean sample size per strain10.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 13115.8771 1873.6967 32.4846 < 0.0001
Residuals 76 4383.6443 57.6795


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S6/SvEvTac m 3.91 5.29   10 1.67 1.35 -0.2
A/J m 40.0 19.9   10 6.3 0.498 2.44
BALB/cByJ m 1.67 3.75   10 1.19 2.25 -0.37
C3H/HeJ m 0.56 1.77   10 0.56 3.16 -0.45
C57BL/6J m 0.0 0.0   10 0.0 0.0 -0.49
CBA/J m 6.13 5.53   10 1.75 0.902 -0.04
DBA/1J m 0.0 0.0   10 0.0 0.0 -0.49
DBA/2J m 1.19 3.22   14 0.86 2.7 -0.4


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S6/SvEvTac m 3.91 2.4017 8.6933 -0.8733
A/J m 40.0 2.4017 44.7833 35.2167
BALB/cByJ m 1.67 2.4017 6.4533 -3.1133
C3H/HeJ m 0.56 2.4017 5.3433 -4.2233
C57BL/6J m 0.0 2.4017 4.7833 -4.7833
CBA/J m 6.13 2.4017 10.9133 1.3467
DBA/1J m 0.0 2.4017 4.7833 -4.7833
DBA/2J m 1.1929 2.0298 5.2355 -2.8498




  GWAS USING LINEAR MIXED MODELS