Project measure / variable:   Gould2   FC_preCS_acu_045

ID, description, units MPD:47142   FC_preCS_acu_045   acute group, percent immobility in altered context chamber, pre-cue   [%]  dose: 0.045 mg  
nicotine study
Data set, strains Gould2   inbred   8 strains     sex: m     age:
Procedure fear conditioning test
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  STRAIN COMPARISON PLOT
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Gould2 - acute group, percent immobility in altered context chamber, pre-cue dose: 0.045 mg

A/JCBA/J129S6/SvEvTacC3H/HeJDBA/2JBALB/cByJDBA/1JC57BL/6J % -5051015202530354045femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means4.04   %
Median of the strain means0.591   %
SD of the strain means± 9.62
Coefficient of variation (CV)2.38
Min–max range of strain means0   –   27.8   %
Mean sample size per strain10.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 6574.5116 939.2159 70.7203 < 0.0001
Residuals 79 1049.1756 13.2807


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S6/SvEvTac m 1.68 2.71   10 0.855 1.61 -0.25
A/J m 27.8 9.78   10 3.09 0.352 11.1, 44.4 2.47
BALB/cByJ m 0.0 0.0   10 0.0 0.0 -0.42
C3H/HeJ m 0.622 1.87   9 0.622 3.0 -0.36
C57BL/6J m 0.0 0.0   14 0.0 0.0 -0.42
CBA/J m 1.68 2.71   10 0.855 1.61 -0.25
DBA/1J m 0.0 0.0   14 0.0 0.0 -0.42
DBA/2J m 0.56 1.77   10 0.56 3.16 -0.36


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S6/SvEvTac m 1.68 1.1524 3.9738 -0.6138
A/J m 27.76 1.1524 30.0538 25.4662
BALB/cByJ m 0.0 1.1524 2.2938 -2.2938
C3H/HeJ m 0.6222 1.2148 3.0401 -1.7957
C57BL/6J m 0.0 0.974 1.9386 -1.9386
CBA/J m 1.68 1.1524 3.9738 -0.6138
DBA/1J m 0.0 0.974 1.9386 -1.9386
DBA/2J m 0.56 1.1524 2.8538 -1.7338




  GWAS USING LINEAR MIXED MODELS

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