Project measure / variable:   Gould2   FC_preCS_acu_0

ID, description, units MPD:47141   FC_preCS_acu_0   acute group, percent immobility in altered context chamber, pre-cue   [%]  dose: control mg  
nicotine study
Data set, strains Gould2   inbred   8 strains     sex: m     age:
Procedure fear conditioning test
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  STRAIN COMPARISON PLOT
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Gould2 - acute group, percent immobility in altered context chamber, pre-cue dose: control mg



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means4.78   %
Median of the strain means0.696   %
SD of the strain means± 11.2
Coefficient of variation (CV)2.33
Min–max range of strain means0   –   32.3   %
Mean sample size per strain12.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 9765.7992 1395.1142 45.4044 < 0.0001
Residuals 91 2796.1027 30.7264


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S6/SvEvTac m 1.86 3.62   12 1.05 1.95 -0.26
A/J m 32.3 15.3   11 4.6 0.472 5.6, 50.0 2.47
BALB/cByJ m 0.0 0.0   12 0.0 0.0 -0.43
C3H/HeJ m 0.925 3.2   12 0.925 3.46 -0.35
C57BL/6J m 0.4 1.5   14 0.4 3.74 -0.39
CBA/J m 2.32 3.72   12 1.07 1.6 -0.22
DBA/1J m 0.0 0.0   14 0.0 0.0 -0.43
DBA/2J m 0.467 1.62   12 0.467 3.46 -0.39


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S6/SvEvTac m 1.8583 1.6002 5.0369 -1.3202
A/J m 32.3273 1.6713 35.6471 29.0074
BALB/cByJ m 0.0 1.6002 3.1785 -3.1785
C3H/HeJ m 0.925 1.6002 4.1035 -2.2535
C57BL/6J m 0.4 1.4815 3.3428 -2.5428
CBA/J m 2.325 1.6002 5.5035 -0.8535
DBA/1J m 0.0 1.4815 2.9428 -2.9428
DBA/2J m 0.4667 1.6002 3.6452 -2.7119




  GWAS USING LINEAR MIXED MODELS