Project measure / variable:   Boon1   bw_start_med

ID, description, units MPD:46902   bw_start_med   body weight, pre-infection   [g]  dose group: medium  
Data set, strains Boon1   inbred   22 strains     sex: f     age: 6-9wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Boon1 - body weight, pre-infection dose group: medium



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means19.5   g
Median of the strain means18.7   g
SD of the strain means± 3.85
Coefficient of variation (CV)0.197
Min–max range of strain means13.2   –   30.0   g
Mean sample size per strain10.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 1835.8954 87.4236 21.3328 < 0.0001
Residuals 309 1266.3061 4.0981


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 17.4 2.05   12 0.592 0.118 13.2, 20.1 -0.55
129X1/SvJ f 21.2 0.369   5 0.165 0.0174 20.7, 21.6 0.43
A/HeJ f 17.4 2.87   10 0.906 0.165 12.3, 21.3 -0.55
A/J f 18.3 2.08   10 0.659 0.114 14.1, 20.6 -0.32
AKR/J f 23.2 0.543   5 0.243 0.0234 22.7, 24.0 0.95
B10.D2-Hc0 f 20.8 3.46   15 0.893 0.166 15.7, 25.7 0.33
B10.D2-Hc1 f 18.6 1.14   9 0.38 0.0611 16.9, 20.7 -0.24
B6D2F1/J f 18.0 0.835   15 0.216 0.0464 16.4, 18.9 -0.4
BALB/cByJ f 16.8 1.94   10 0.613 0.115 12.5, 18.6 -0.71
BALB/cJ f 15.9 1.25   5 0.558 0.0783 14.6, 17.6 -0.94
BTBR T+ Itpr3tf/J f 22.6 1.33   8 0.47 0.0587 20.3, 24.8 0.8
C3H/HeJ f 17.4 1.92   10 0.608 0.111 13.6, 20.0 -0.55
C57BL/6J f 17.9 1.56   110 0.149 0.0873 14.2, 22.8 -0.42
DBA/2J f 18.9 2.84   55 0.383 0.15 14.3, 25.1 -0.16
FVB/NJ f 18.8 0.852   10 0.269 0.0454 17.7, 20.1 -0.19
KK/HlJ f 26.7 0.781   4 0.391 0.0293 25.6, 27.4 1.86
LP/J f 13.8 2.35   9 0.784 0.171 10.7, 18.0 -1.49
MRL/MpJ f 30.0 2.15   5 0.963 0.0718 27.8, 32.9 2.72
NOD/ShiLtJ f 20.6 2.06   5 0.919 0.0999 18.8, 23.7 0.28
NZB/BlNJ f 21.8 1.87   6 0.762 0.0855 19.8, 24.6 0.59
NZW/LacJ f 20.3 1.62   10 0.512 0.0797 18.0, 22.3 0.2
SM/J f 13.2 0.874   3 0.504 0.066 12.5, 14.2 -1.65


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 17.3517 0.5844 18.5015 16.2018
129X1/SvJ f 21.174 0.9053 22.9554 19.3926
A/HeJ f 17.391 0.6402 18.6506 16.1314
A/J f 18.268 0.6402 19.5276 17.0084
AKR/J f 23.2 0.9053 24.9814 21.4186
B10.D2-Hc0 f 20.822 0.5227 21.8505 19.7935
B10.D2-Hc1 f 18.6444 0.6748 19.9722 17.3167
B6D2F1/J f 17.9933 0.5227 19.0218 16.9649
BALB/cByJ f 16.81 0.6402 18.0696 15.5504
BALB/cJ f 15.94 0.9053 17.7214 14.1586
BTBR T+ Itpr3tf/J f 22.645 0.7157 24.0533 21.2367
C3H/HeJ f 17.355 0.6402 18.6146 16.0954
C57BL/6J f 17.9224 0.193 18.3022 17.5426
DBA/2J f 18.8742 0.273 19.4113 18.3371
FVB/NJ f 18.765 0.6402 20.0246 17.5054
KK/HlJ f 26.6525 1.0122 28.6441 24.6609
LP/J f 13.7533 0.6748 15.0811 12.4256
MRL/MpJ f 29.99 0.9053 31.7714 28.2086
NOD/ShiLtJ f 20.576 0.9053 22.3574 18.7946
NZB/BlNJ f 21.85 0.8264 23.4762 20.2238
NZW/LacJ f 20.321 0.6402 21.5806 19.0614
SM/J f 13.2333 1.1688 15.5331 10.9336




  GWAS USING LINEAR MIXED MODELS